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L1_007_122G1_scaffold_39

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Displaying items 1-30 of 334 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_39_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(71..289)
-----------------
DNA (219bp)
protein (73aa)
Colanic acid capsular biosynthesis activation protein A n=1 Tax=Escherichia coli KOEGE 7 (16a) RepID=U0CF70_ECOLX
Transcriptional regulatory protein RcsA {ECO:0000256|HAMAP-Rule:MF_00982}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
rcsA; colanic acid capsular biosynthesis activation protein A
L1_007_122G1_scaffold_39_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(539..1324)
-----------------
DNA (786bp)
protein (262aa)
Flagellar biosynthetic protein fliR n=28 Tax=Enterobacteriaceae RepID=D8AVM8_ECOLX
fliR; flagellar biosynthesis protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L1_007_122G1_scaffold_39_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1333..1602)
-----------------
DNA (270bp)
protein (90aa)
Flagellar biosynthetic protein FliQ n=1346 Tax=Enterobacteriaceae RepID=FLIQ_ECO57
fliQ; Flagellar biosynthesis protein
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:KDY19453.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L1_007_122G1_scaffold_39_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1612..2349)
-----------------
DNA (738bp)
protein (246aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3)
Flagellar biosynthetic protein FliP n=325 Tax=Enterobacteriaceae RepID=B1IZW1_ECOLC
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EHU44906.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L1_007_122G1_scaffold_39_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2349..2714)
-----------------
DNA (366bp)
protein (122aa)
Flagellar protein FliO n=335 Tax=Enterobacteriaceae RepID=FLIO_ECOLI
fliO; flagellar biosynthesis protein FliO
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:ESA79510.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L1_007_122G1_scaffold_39_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2717..3130)
-----------------
DNA (414bp)
protein (138aa)
Flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction n=839 Tax=Enterobacteriaceae RepID=C3T4T3_ECOLX
fliN; flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EFJ86801.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L1_007_122G1_scaffold_39_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3127..4131)
-----------------
DNA (1005bp)
protein (335aa)
Flagellar motor switch protein FliM n=1239 Tax=Gammaproteobacteria RepID=C3T4T7_ECOLX
flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L1_007_122G1_scaffold_39_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4136..4600)
-----------------
DNA (465bp)
protein (155aa)
Flagellar protein FliL n=1009 Tax=Enterobacteriaceae RepID=FLIL_ECO57
fliL; flagellar basal body-associated protein FliL
Flagellar protein FliL {ECO:0000313|EMBL:EQN27301.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L1_007_122G1_scaffold_39_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4705..5832)
-----------------
DNA (1128bp)
protein (376aa)
Flagellar hook-length control protein n=2 Tax=Escherichia coli RepID=S1DR73_ECOLX
Flagellar hook-length control protein {ECO:0000313|EMBL:EOV61683.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
flagellar hook-length control protein
L1_007_122G1_scaffold_39_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5829..6272)
-----------------
DNA (444bp)
protein (148aa)
Flagellar fliJ protein n=1137 Tax=Enterobacteriaceae RepID=C3T4V2_ECOLX
flagellar export protein FliJ
Flagellar FliJ protein {ECO:0000256|PIRNR:PIRNR019404}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
L1_007_122G1_scaffold_39_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6291..7664)
-----------------
DNA (1374bp)
protein (458aa)
fliI; flagellum-specific ATP synthase (EC:3.6.3.14)
Flagellum-specific ATP synthase n=2 Tax=Escherichia coli RepID=S1D670_ECOLX
Flagellum-specific ATP synthase {ECO:0000313|EMBL:EOV61681.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L1_007_122G1_scaffold_39_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7664..8350)
-----------------
DNA (687bp)
protein (229aa)
Flagellar biosynthesis protein n=229 Tax=Enterobacteriaceae RepID=Q3Z0P8_SHISS
flagellar assembly protein FliH
HrpE/YscL/FliH and V-type ATPase subunit E family protein {ECO:0000313|EMBL:ENA30941.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L1_007_122G1_scaffold_39_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8343..9338)
-----------------
DNA (996bp)
protein (332aa)
Flagellar motor switch protein FliG n=1290 Tax=Enterobacteriaceae RepID=FLIG_ECO57
flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
L1_007_122G1_scaffold_39_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9331..10989)
-----------------
DNA (1659bp)
protein (553aa)
Flagellar M-ring protein n=17 Tax=Escherichia coli RepID=E0J1A8_ECOLW
fliF; flagellar MS-ring protein
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L1_007_122G1_scaffold_39_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..11518
-----------------
DNA (315bp)
protein (105aa)
Flagellar hook-basal body complex protein FliE n=566 Tax=Bacteria RepID=FLIE_ECO27
fliE; flagellar hook-basal body protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L1_007_122G1_scaffold_39_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11869..12672
-----------------
DNA (804bp)
protein (268aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=S1D667_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV61676.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
L1_007_122G1_scaffold_39_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12682..12873
-----------------
DNA (192bp)
protein (64aa)
Putative uncharacterized protein YedN n=21 Tax=Escherichia coli RepID=YEDN_ECOLI
yedN; protein, C-ter fragment, truncated protein
Uncharacterized protein {ECO:0000313|EMBL:ELE60370.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L1_007_122G1_scaffold_39_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13079..13750)
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=8 Tax=Escherichia coli RepID=L3EXV1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELE60369.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
hypothetical protein
L1_007_122G1_scaffold_39_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13857..14090)
-----------------
DNA (234bp)
protein (78aa)
UPF0033 protein YedF n=1782 Tax=Enterobacteriaceae RepID=YEDF_ECO57
yedF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34916.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L1_007_122G1_scaffold_39_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14087..15292)
-----------------
DNA (1206bp)
protein (402aa)
YeeE/YedE family protein n=333 Tax=Enterobacteriaceae RepID=B2N9B1_ECOLX
inner membrane protein YedE
Putative membrane protein {ECO:0000313|EMBL:CBJ01540.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L1_007_122G1_scaffold_39_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15479..15892
-----------------
DNA (414bp)
protein (138aa)
Uncharacterized protein n=865 Tax=Enterobacteriaceae RepID=C3T502_ECOLX
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EII19430.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L1_007_122G1_scaffold_39_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15926..17413)
-----------------
DNA (1488bp)
protein (496aa)
Cytoplasmic alpha-amylase n=2 Tax=Escherichia coli RepID=S1DSR3_ECOLX
Cytoplasmic alpha-amylase {ECO:0000313|EMBL:EOW07146.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
amyA; cytoplasmic alpha-amylase
L1_007_122G1_scaffold_39_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17491..17856)
-----------------
DNA (366bp)
protein (122aa)
Flagellar protein FliT n=29 Tax=Escherichia coli RepID=B2N9B4_ECOLX
Flagellar protein FliT {ECO:0000256|HAMAP-Rule:MF_01180, ECO:0000256|SAAS:SAAS00068921}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
flagellar biosynthesis protein FliT
L1_007_122G1_scaffold_39_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17856..18266)
-----------------
DNA (411bp)
protein (137aa)
Flagellar biosynthesis repressor of class 3a and 3b operons (RflA activity) n=769 Tax=Enterobacteriaceae RepID=E2QNC1_ECOLX
fliS; flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:KDZ35558.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L1_007_122G1_scaffold_39_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18291..19697)
-----------------
DNA (1407bp)
protein (469aa)
Flagellar hook-associated protein 2 n=62 Tax=Escherichia coli RepID=A7ZN50_ECO24
fliD; flagellar capping protein
Flagellar capping protein {ECO:0000313|EMBL:AFH11717.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L1_007_122G1_scaffold_39_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19963..21675
-----------------
DNA (1713bp)
protein (571aa)
FliC n=7 Tax=Escherichia coli RepID=Q842C1_ECOLX
Flagellar filament structural protein (Flagellin) {ECO:0000313|EMBL:EOV61666.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
fliC; flagellin
L1_007_122G1_scaffold_39_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21995..22714
-----------------
DNA (720bp)
protein (240aa)
RNA polymerase sigma factor FliA n=1 Tax=Escherichia coli KTE64 RepID=S1DSQ6_ECOLX
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
fliA; flagellar biosynthesis sigma factor
L1_007_122G1_scaffold_39_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22760..23311
-----------------
DNA (552bp)
protein (184aa)
FliZ protein n=39 Tax=Escherichia coli RepID=B2N9C0_ECOLX
Flagellar regulatory protein FliZ {ECO:0000313|EMBL:EOW07140.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
flagella biosynthesis protein FliZ
L1_007_122G1_scaffold_39_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23342..24199
-----------------
DNA (858bp)
protein (286aa)
Extracellular solute-binding protein family 3 n=174 Tax=Escherichia RepID=B1IZY4_ECOLC
fliY; cystine transporter subunit
Cystine ABC transporter, cystine-binding periplasmic protein {ECO:0000313|EMBL:EGI45585.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L1_007_122G1_scaffold_39_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24304..25290
-----------------
DNA (987bp)
protein (329aa)
yedO; D-cysteine desulfhydrase (EC:4.4.1.15)
D-cysteine desulfhydrase {ECO:0000256|HAMAP-Rule:MF_01045}; EC=4.4.1.15 {ECO:0000256|HAMAP-Rule:MF_01045};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
D-cysteine desulfhydrase n=8 Tax=Escherichia coli RepID=D7Y0X3_ECOLX
Displaying items 1-30 of 334 in total

View Taxonomy