ggKbase home page

L1_007_122G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_40_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CEP45558.1}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CEP45558.1};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VVC3_CLOBI
L1_007_122G1_scaffold_40_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(811..1896)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI95461.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
conserved hypothetical protein
L1_007_122G1_scaffold_40_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2075..2809
DNA (735bp) protein (245aa)
HAD hydrolase, family IB n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K0_9FIRM
HAD hydrolase, family IB {ECO:0000313|EMBL:EDQ97318.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
phosphoserine phosphatase
L1_007_122G1_scaffold_40_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2833..3795
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97319.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_40_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3987..5042
DNA (1056bp) protein (352aa)
radical SAM domain-containing protein (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K2_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EDQ97320.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_122G1_scaffold_40_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5206..6135)
DNA (930bp) protein (310aa)
Cysteine synthase A {ECO:0000313|EMBL:EDQ97321.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EDQ97321.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
cysteine synthase (EC:2.5.1.47)
Cysteine synthase A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K3_9FIRM
L1_007_122G1_scaffold_40_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6184..7494)
DNA (1311bp) protein (437aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K4_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EDQ97322.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L1_007_122G1_scaffold_40_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7690..8124)
DNA (435bp) protein (145aa)
Transcriptional regulator Rrf2 family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XY52_9CLOT
Transcriptional regulator Rrf2 family {ECO:0000313|EMBL:CDA09417.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional regulator, BadM/Rrf2 family
L1_007_122G1_scaffold_40_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8523..9416
DNA (894bp) protein (298aa)
UPI0003D627E3 related cluster n=1 Tax=unknown RepID=UPI0003D627E3
Uncharacterized protein {ECO:0000313|EMBL:ETI94089.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
AraC family HTH transcriptional regulator
L1_007_122G1_scaffold_40_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9478..9963)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97325.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_40_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9981..10397)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97326.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_40_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10387..11226)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97327.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_40_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11412..12338
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L0_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDQ97328.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transcriptional regulator, LysR family
L1_007_122G1_scaffold_40_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12600..13790
DNA (1191bp) protein (397aa)
Methionine gamma-lyase {ECO:0000313|EMBL:EDQ97329.1}; EC=4.4.1.11 {ECO:0000313|EMBL:EDQ97329.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
mdeA2; methionine gamma-lyase MdeA (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L1_9FIRM
L1_007_122G1_scaffold_40_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13879..14706)
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L2_9FIRM
L1_007_122G1_scaffold_40_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14869..15423)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5XAI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09409.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
nitroreductase
L1_007_122G1_scaffold_40_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15618..15881)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97332.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_40_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16081..17436)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97333.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sodium:alanine symporter family protein
L1_007_122G1_scaffold_40_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17947..19251
DNA (1305bp) protein (435aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L6_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDQ97334.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Transporter, Major Facilitator Superfamily(MFS)
L1_007_122G1_scaffold_40_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19411..23103
DNA (3693bp) protein (1231aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L7_9FIRM
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EDQ97335.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Cation/multidrug efflux pump
L1_007_122G1_scaffold_40_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23244..25184)
DNA (1941bp) protein (647aa)
Hsp90 protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XAI2_9CLOT
Hsp90 protein {ECO:0000313|EMBL:CDA09404.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
htpG; heat shock protein 90
L1_007_122G1_scaffold_40_22

Not on your lists

25763..26788
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DGF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17596.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_40_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26938..27303)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97337.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_40_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27554..27973)
DNA (420bp) protein (140aa)
Putative Hsp20 family chaperone n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XY34_9CLOT
Putative Hsp20 family chaperone {ECO:0000313|EMBL:CDA09402.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_40_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28151..28585)
DNA (435bp) protein (145aa)
Hsp20/alpha crystallin family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XLI2_9CLOT
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDA09401.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L1_007_122G1_scaffold_40_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28915..30099)
DNA (1185bp) protein (395aa)
Amidohydrolase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7M2_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EDQ97340.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
N-acyl-L-amino acid amidohydrolase
L1_007_122G1_scaffold_40_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30211..32031)
DNA (1821bp) protein (607aa)
SH3 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3K7_9CLOT
SH3 domain protein {ECO:0000313|EMBL:CDA09395.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
PPIC-type PPIASE domain protein
L1_007_122G1_scaffold_40_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32231..36001)
DNA (3771bp) protein (1257aa)
purL; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
UPI0003D5EA7B related cluster n=1 Tax=unknown RepID=UPI0003D5EA7B
Uncharacterized protein {ECO:0000313|EMBL:ETI96297.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L1_007_122G1_scaffold_40_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36057..37307)
DNA (1251bp) protein (417aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
UPI0003D614B7 related cluster n=1 Tax=unknown RepID=UPI0003D614B7
L1_007_122G1_scaffold_40_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37332..37925)
DNA (594bp) protein (198aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7M6_9FIRM
purN; phosphoribosylglycinamide formyltransferase
Displaying items 1-30 of 159 in total

View Taxonomy