ggKbase home page

L1_007_122G1_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_43_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(2..670)
DNA (669bp) protein (223aa)
Hydantoin racemase (EC:5.1.99.5)
Hydantoin racemase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZK3_9FIRM
Hydantoin racemase {ECO:0000313|EMBL:CDB02544.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_43_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

1028..1492
DNA (465bp) protein (155aa)
Arginine repressor n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERL4_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
argR; arginine repressor
L1_007_122G1_scaffold_43_3
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

1489..3111
DNA (1623bp) protein (541aa)
DNA repair protein RecN n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DZP8_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
DNA replication and repair protein RecN
L1_007_122G1_scaffold_43_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(3164..4900)
DNA (1737bp) protein (579aa)
Hydrogenase Fe-only n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKG3_9FIRM
Hydrogenase Fe-only {ECO:0000313|EMBL:CDB02547.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hydrogenase, Fe-only
L1_007_122G1_scaffold_43_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(4894..6744)
DNA (1851bp) protein (617aa)
Pyridine nucleotide-disulphide oxidoreductase family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPR2_9FIRM
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDB02548.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
glutamate synthase (NADPH)
L1_007_122G1_scaffold_43_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(6747..7649)
DNA (903bp) protein (301aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZK6_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB02549.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Permease of the drug/metabolite transporter (DMT) superfamily
L1_007_122G1_scaffold_43_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(7653..8702)
DNA (1050bp) protein (350aa)
DNA polymerase III delta subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERL8_9FIRM
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDB02550.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA polymerase III, delta subunit
L1_007_122G1_scaffold_43_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(8705..10774)
DNA (2070bp) protein (690aa)
DNA internalization competence protein ComEC/Rec2-like protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0K8_9FIRM
DNA internalization competence protein ComEC/Rec2-like protein {ECO:0000313|EMBL:CDB02551.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA internalization-related competence protein ComEC/Rec2
L1_007_122G1_scaffold_43_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

10937..14062
DNA (3126bp) protein (1042aa)
pbpA2; Penicillin-binding protein 1A (EC:2.4.1.- 3.4.-.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02552.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_43_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(14155..14802)
DNA (648bp) protein (216aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPR7_9FIRM
ribulose-phosphate 3-epimerase
L1_007_122G1_scaffold_43_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(14826..15701)
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZL0_9FIRM
L1_007_122G1_scaffold_43_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(15708..17435)
DNA (1728bp) protein (576aa)
Putative serine/threonine-protein kinase PrkC n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERM1_9FIRM
Putative serine/threonine-protein kinase PrkC {ECO:0000313|EMBL:CDB02555.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_43_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(17428..18174)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02556.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
serine/threonine protein phosphatase
L1_007_122G1_scaffold_43_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(18186..19448)
DNA (1263bp) protein (421aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Sun protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKH3_9FIRM
L1_007_122G1_scaffold_43_15
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(19448..20161)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DVB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91560.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
peptidase membrane zinc metallopeptidase
L1_007_122G1_scaffold_43_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(20170..21099)
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZL3_9FIRM
L1_007_122G1_scaffold_43_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21104..21589)
DNA (486bp) protein (162aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Peptide deformylase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERM6_9FIRM
peptide deformylase
L1_007_122G1_scaffold_43_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21606..23615)
DNA (2010bp) protein (670aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
priA; primosome assembly protein PriA (EC:3.6.4.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0L5_9FIRM
L1_007_122G1_scaffold_43_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(23625..24635)
DNA (1011bp) protein (337aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKH8_9FIRM
L1_007_122G1_scaffold_43_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(24647..25300)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02563.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_43_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

25397..26344
DNA (948bp) protein (316aa)
Radical SAM protein TIGR01212 family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZL7_9FIRM
Radical SAM protein TIGR01212 family {ECO:0000313|EMBL:CDB02564.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
radical SAM protein, TIGR01212 family
L1_007_122G1_scaffold_43_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(26370..27071)
DNA (702bp) protein (234aa)
MgtC family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERN0_9FIRM
MgtC family protein {ECO:0000313|EMBL:CDB02565.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
MgtC family protein
L1_007_122G1_scaffold_43_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(27068..28396)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02566.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_43_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(28411..30579)
DNA (2169bp) protein (723aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKI2_9FIRM
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:CDB02567.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
glycoside hydrolase family 73 protein
L1_007_122G1_scaffold_43_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(30582..31187)
DNA (606bp) protein (202aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
tdk; thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPS7_9FIRM
L1_007_122G1_scaffold_43_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

31452..31787
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02569.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_43_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

31803..32441
DNA (639bp) protein (213aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERN6_9FIRM
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:CDB02570.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_43_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(34386..35015)
DNA (630bp) protein (210aa)
YigZ family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0M2_9FIRM
YigZ family protein {ECO:0000313|EMBL:CDB02571.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_43_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(35002..36282)
DNA (1281bp) protein (427aa)
GTPase HflX n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPT1_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ynbA; putative GTP-binding protein YnbA
L1_007_122G1_scaffold_43_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(36307..36936)
DNA (630bp) protein (210aa)
Sporulation protein YunB n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZM4_9FIRM
Sporulation protein YunB {ECO:0000313|EMBL:CDB02574.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
Displaying items 1-30 of 158 in total

View Taxonomy