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L1_007_122G1_scaffold_55

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Displaying items 1-30 of 144 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_55_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(130..672)
DNA (543bp) protein (181aa)
Sfm fimbrial protein, A chain n=881 Tax=Enterobacteriaceae RepID=SFMA_ECO57
type-1 fimbrial protein subunit A
Type-1 fimbrial protein, A chain {ECO:0000313|EMBL:KDY13932.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L1_007_122G1_scaffold_55_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1143..2009
DNA (867bp) protein (289aa)
Bifunctional protein FolD n=310 Tax=Enterobacteriaceae RepID=FOLD_ECO8A
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L1_007_122G1_scaffold_55_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2011..2223
DNA (213bp) protein (71aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=I0VAB1_SHIFL
hypothetical protein
Ribosome-associated protein {ECO:0000313|EMBL:EOW09960.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L1_007_122G1_scaffold_55_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2331..2852
DNA (522bp) protein (174aa)
Uncharacterized protein n=210 Tax=Enterobacteriaceae RepID=A7ZIT6_ECO24
ybcI; hypothetical protein
Inner membrane protein ybcI {ECO:0000313|EMBL:EMX55135.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
L1_007_122G1_scaffold_55_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2888..4273)
DNA (1386bp) protein (462aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
Cysteine--tRNA ligase n=785 Tax=Enterobacteriaceae RepID=SYC_ECO24
L1_007_122G1_scaffold_55_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4447..4941
DNA (495bp) protein (165aa)
ppiB; Peptidyl-prolyl cis-trans isomerase ppiB (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
Peptidyl-prolyl cis-trans isomerase n=839 Tax=Enterobacteriaceae RepID=C3TKM2_ECOLX
L1_007_122G1_scaffold_55_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4944..5666
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
UDP-2,3-diacylglucosamine hydrolase n=234 Tax=Enterobacteriaceae RepID=LPXH_ECO24
lpxH; UDP-2,3-diacylglucosamine hydrolase
L1_007_122G1_scaffold_55_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5784..6293
DNA (510bp) protein (170aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1039 Tax=root RepID=PURE_ECO57
L1_007_122G1_scaffold_55_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6290..7357
DNA (1068bp) protein (356aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=4 Tax=Escherichia coli RepID=D7Y5P6_ECOLX
purK; N5-carboxyaminoimidazole ribonucleotide synthase
L1_007_122G1_scaffold_55_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7552..8445)
DNA (894bp) protein (298aa)
ybcF; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=3 Tax=Escherichia coli RepID=D7Y5P4_ECOLX
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L1_007_122G1_scaffold_55_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8442..9257)
DNA (816bp) protein (272aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=D7Y5P3_ECOLX
Carboxylase {ECO:0000313|EMBL:EOW09952.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
putative carboxylase
L1_007_122G1_scaffold_55_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9268..10527)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=D7Y5P2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW09951.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ylbE; hypothetical protein
L1_007_122G1_scaffold_55_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10537..12204)
DNA (1668bp) protein (556aa)
Protein fdrA n=3 Tax=Escherichia coli RepID=L3IFD8_ECOLX
Protein fdrA {ECO:0000313|EMBL:ELD73105.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
membrane protein FdrA
L1_007_122G1_scaffold_55_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12522..13571
DNA (1050bp) protein (350aa)
Ureidoglycolate dehydrogenase n=1 Tax=Escherichia coli KTE100 RepID=S1HQL9_ECOLX
Ureidoglycolate dehydrogenase {ECO:0000313|EMBL:EOW09949.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
allD; ureidoglycolate dehydrogenase
L1_007_122G1_scaffold_55_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13593..14828
DNA (1236bp) protein (412aa)
Allantoate amidohydrolase n=6 Tax=Escherichia coli RepID=D7Y5N8_ECOLX
Allantoate amidohydrolase {ECO:0000313|EMBL:ELD73103.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
allC; allantoate amidohydrolase
L1_007_122G1_scaffold_55_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14839..15624
DNA (786bp) protein (262aa)
Allantoin catabolism protein n=5 Tax=Escherichia coli RepID=K3JXF5_ECOLX
Ureidoglycine aminohydrolase {ECO:0000313|EMBL:EOV64885.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
L1_007_122G1_scaffold_55_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15752..16897)
DNA (1146bp) protein (382aa)
Glycerate kinase {ECO:0000313|EMBL:EGJ07363.1}; EC=2.7.1.31 {ECO:0000313|EMBL:EGJ07363.1};; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
Glycerate kinase n=190 Tax=Enterobacteriaceae RepID=B6I0G4_ECOSE
glycerate kinase
L1_007_122G1_scaffold_55_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16919..18220)
DNA (1302bp) protein (434aa)
Uracil/xanthine transporter n=4 Tax=Escherichia coli RepID=L3IFD2_ECOLX
Uracil/xanthine transporter {ECO:0000313|EMBL:ELD73100.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
ybbY; putative uracil/xanthine transporter
L1_007_122G1_scaffold_55_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18277..19638)
DNA (1362bp) protein (454aa)
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
allantoinase (EC:3.5.2.5)
Allantoinase n=1 Tax=Escherichia coli KTE100 RepID=S1HQL4_ECOLX
L1_007_122G1_scaffold_55_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19698..21152)
DNA (1455bp) protein (485aa)
NCS1 nucleoside transporter family protein n=4 Tax=Escherichia coli RepID=D7Y5N3_ECOLX
NCS1 nucleoside transporter {ECO:0000313|EMBL:EOW09943.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ybbW; allantoin permease
L1_007_122G1_scaffold_55_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21321..22199)
DNA (879bp) protein (293aa)
2-hydroxy-3-oxopropionate reductase n=4 Tax=Escherichia coli RepID=D7Y5N2_ECOLX
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EOW09942.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
tartronate semialdehyde reductase
L1_007_122G1_scaffold_55_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22299..23075)
DNA (777bp) protein (259aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CAR11764.1}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241, ECO:0000313|EMBL:CAR11764.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Hydroxypyruvate isomerase n=383 Tax=Enterobacteriaceae RepID=C3TKU7_ECOLX
hydroxypyruvate isomerase
L1_007_122G1_scaffold_55_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23088..24869)
DNA (1782bp) protein (594aa)
Glyoxylate carboligase n=3 Tax=Escherichia coli RepID=L3IFC6_ECOLX
Glyoxylate carboligase {ECO:0000313|EMBL:EOV64878.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
gcl; glyoxylate carboligase
L1_007_122G1_scaffold_55_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24959..25774)
DNA (816bp) protein (272aa)
HTH-type transcriptional repressor AllR n=585 Tax=Enterobacteriaceae RepID=ALLR_ECO57
DNA-binding transcriptional repressor AllR
DNA-binding transcriptional repressor AllR {ECO:0000313|EMBL:EMD14751.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L1_007_122G1_scaffold_55_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25852..26334)
DNA (483bp) protein (161aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
Ureidoglycolate lyase n=751 Tax=Enterobacteriaceae RepID=ALLA_ECO57
ureidoglycolate hydrolase YbbT
L1_007_122G1_scaffold_55_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26564..27490
DNA (927bp) protein (309aa)
HTH-type transcriptional activator AllS n=657 Tax=Enterobacteriaceae RepID=ALLS_ECO57
AllS family transcriptional regulator
HTH-type transcriptional activator AllS {ECO:0000313|EMBL:EMU71904.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L1_007_122G1_scaffold_55_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27559..28653
DNA (1095bp) protein (365aa)
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
tRNA 2-selenouridine synthase n=4 Tax=Escherichia coli RepID=D7Y7L6_ECOLX
ybbB; tRNA 2-selenouridine synthase
L1_007_122G1_scaffold_55_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29366..31780)
DNA (2415bp) protein (805aa)
Efflux ABC transporter, permease protein n=6 Tax=Escherichia coli RepID=D7Y7L3_ECOLX
ABC transporter permease {ECO:0000313|EMBL:EOW09935.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ybbP; oxidoreductase
L1_007_122G1_scaffold_55_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31777..32463)
DNA (687bp) protein (229aa)
ABC transporter, ATP-binding protein n=4 Tax=Escherichia coli RepID=D7Y7L2_ECOLX
ABC transporter ATP-binding protein YbbA {ECO:0000313|EMBL:EOV64872.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
ybbA; Putative ABC transporter
L1_007_122G1_scaffold_55_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32464..33057
DNA (594bp) protein (198aa)
lysophospholipase (EC:3.1.1.5)
Lysophospholipase n=534 Tax=Escherichia RepID=B1IZA0_ECOLC
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 {ECO:0000313|EMBL:EID66435.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
Displaying items 1-30 of 144 in total

View Taxonomy