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L1_007_122G1_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_118_1
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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67..1479
DNA (1413bp) protein (471aa)
Transposase IS4 family protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKH2_DESRL
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEG59232.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L1_007_122G1_scaffold_118_2
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1516..2325)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LQ30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW97666.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
L1_007_122G1_scaffold_118_3
unknown

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comp(2388..2879)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CMC5_9FIRM
L1_007_122G1_scaffold_118_4
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3026..4174
DNA (1149bp) protein (383aa)
Transposase n=4 Tax=Clostridium RepID=E9STX7_CLOSY
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:KJJ74819.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_118_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4246..4545)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KJJ74818.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L1_007_122G1_scaffold_118_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5329..5547
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AK95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74817.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_118_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5627..6730)
DNA (1104bp) protein (368aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
Methionine-S-sulfoxide reductase n=3 Tax=Clostridiales RepID=E7GME1_CLOSY
Peptide methionine sulfoxide reductase MsrA/MsrB {ECO:0000313|EMBL:KJJ74816.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L1_007_122G1_scaffold_118_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6771..7727)
DNA (957bp) protein (319aa)
Redoxin family protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ADD1_9CLOT
Thiol-disulfide oxidoreductase ResA {ECO:0000313|EMBL:KJJ74815.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
AhpC/TSA family.
L1_007_122G1_scaffold_118_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8026..9246
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=5 Tax=Clostridium citroniae WAL-17108 RepID=G5HJ67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98535.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Transposase IS116/IS110/IS902 family./Transposase.
L1_007_122G1_scaffold_118_10
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9345..10286)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKK7_9FIRM
Putative electron transport protein YccM {ECO:0000313|EMBL:KJJ74813.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_118_11
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10574..11251
DNA (678bp) protein (226aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EB70_9FIRM
Transcriptional regulatory protein QseB {ECO:0000313|EMBL:KJJ74812.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_007_122G1_scaffold_118_12
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11248..12399
DNA (1152bp) protein (384aa)
Signal transduction histidine-protein kinase ArlS {ECO:0000313|EMBL:KJJ74811.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ74811.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5U0_9CLOT
Signal transduction histidine kinase
L1_007_122G1_scaffold_118_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12407..12682)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJJ74810.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_118_14
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12860..13378)
DNA (519bp) protein (173aa)
Plasmid recombination enzyme n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPX1_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:KJJ74809.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Plasmid recombination enzyme
L1_007_122G1_scaffold_118_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13416..14090)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKA6_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:KJJ74809.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
recombinase
L1_007_122G1_scaffold_118_16
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14451..14705)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BYE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74808.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_118_17
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14804..15547)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5T7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74807.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_118_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15618..17228)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XP44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97411.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transposase IS4 family protein
L1_007_122G1_scaffold_118_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17419..17790)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CWZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56407.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L1_007_122G1_scaffold_118_20
unknown

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comp(17778..17954)
DNA (177bp) protein (59aa)

This feature has no annotations

L1_007_122G1_scaffold_118_21
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18095..18967
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MMH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71851.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Site-specific recombinase XerD
L1_007_122G1_scaffold_118_22

Not on your lists

18954..20108
DNA (1155bp) protein (385aa)
Transposase, IS801/IS1294 n=1 Tax=gut metagenome RepID=J9D815_9ZZZZ
Transposase, IS801/IS1294 {ECO:0000313|EMBL:EJX08946.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
Putative transposase.
L1_007_122G1_scaffold_118_23
unknown

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20169..20534
DNA (366bp) protein (122aa)

This feature has no annotations

L1_007_122G1_scaffold_118_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20910..21143
DNA (234bp) protein (78aa)
DNA primase (Bacterial type) n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LL45_9FIRM
Putative DNA primase {ECO:0000313|EMBL:EFC96337.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
DNA primase (bacterial type)
L1_007_122G1_scaffold_118_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21264..21554
DNA (291bp) protein (97aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8L5_9CLOT
CHC2 zinc finger domain protein {ECO:0000313|EMBL:ERI80870.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DNA primase (bacterial type)
L1_007_122G1_scaffold_118_26
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21514..22389
DNA (876bp) protein (292aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6B0_9CLOT
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EFE14098.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
phage/plasmid primase
L1_007_122G1_scaffold_118_27

Not on your lists

22514..22801
DNA (288bp) protein (96aa)
Phage/plasmid primase, P4 family domain-containing protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHY7_9FIRM
Phage/plasmid primase, P4 family {ECO:0000313|EMBL:EKC53044.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
phage/plasmid primase, P4 family, C-terminal domain
L1_007_122G1_scaffold_118_28
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

23338..23553
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M2B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88496.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_007_122G1_scaffold_118_29
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23601..23978
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61838.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
plasmid segregation actin-type ATPase ParM
L1_007_122G1_scaffold_118_30
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23994..24530
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LTJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61838.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
plasmid segregation actin-type ATPase ParM
Displaying items 1-30 of 118 in total

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