ggKbase home page

L1_007_122G1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_146_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(505..771)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H7R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY25750.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_007_122G1_scaffold_146_2
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(944..1252)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AH01_9FIRM
Rhodanese-like protein {ECO:0000313|EMBL:EEX20377.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
rhodanese domain-containing protein
L1_007_122G1_scaffold_146_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1449..2525
DNA (1077bp) protein (359aa)
Molybdopterin binding domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EVB3_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:EEG36768.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
molybdopterin binding domain-containing protein
L1_007_122G1_scaffold_146_4
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2536..3036
DNA (501bp) protein (167aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=9 Tax=Clostridium RepID=G5HUI1_9CLOT
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
molybdenum cofactor biosynthesis protein C
L1_007_122G1_scaffold_146_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3089..3994
DNA (906bp) protein (302aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
Cyclic pyranopterin monophosphate synthase n=2 Tax=Lachnospiraceae RepID=F7JNE8_9FIRM
hypothetical protein
L1_007_122G1_scaffold_146_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3998..4972
DNA (975bp) protein (325aa)
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ICN5_9CLOT
Molybdenum cofactor synthesis domain-containing protein {ECO:0000313|EMBL:CCY39868.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
molybdenum cofactor synthesis domain-containing protein
L1_007_122G1_scaffold_146_7
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4997..5851
DNA (855bp) protein (285aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXP3_9CLOT
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EEG75350.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L1_007_122G1_scaffold_146_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5820..6536
DNA (717bp) protein (239aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RZM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14283.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
modB; molybdate ABC transporter permease protein ModB
L1_007_122G1_scaffold_146_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6574..6918
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58641.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ModE family transcriptional regulator
L1_007_122G1_scaffold_146_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7083..8099
DNA (1017bp) protein (339aa)
Dehydrogenase, FMN-dependent n=2 Tax=Clostridium RepID=B6FJK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24666.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
L1_007_122G1_scaffold_146_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

8115..8465
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46340.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L1_007_122G1_scaffold_146_12
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

8481..8984
DNA (504bp) protein (168aa)
transcription elongation factor GreA n=1 Tax=Blautia producta RepID=UPI00035C8954
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
transcription elongation factor GreA
L1_007_122G1_scaffold_146_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9066..9494
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34042.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
hypothetical protein
L1_007_122G1_scaffold_146_14
unknown

Not on your lists

9466..9645
DNA (180bp) protein (60aa)

This feature has no annotations

L1_007_122G1_scaffold_146_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9732..10445
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FVD6_9CLOT
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EEA79999.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
IMP cyclohydrolase-like protein.
L1_007_122G1_scaffold_146_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10458..11636
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=5 Tax=Clostridiales RepID=A5KQK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26242.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_007_122G1_scaffold_146_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11700..12167)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6XPG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08222.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L1_007_122G1_scaffold_146_18
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12632..14554
DNA (1923bp) protein (641aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76057.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
family 5 extracellular solute-binding protein
L1_007_122G1_scaffold_146_19
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14634..15617
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76058.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
putative oligopeptide ABC transporter permease AppB
L1_007_122G1_scaffold_146_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15630..17387
DNA (1758bp) protein (586aa)
ABC transporter permease protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQW5_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDB85974.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_007_122G1_scaffold_146_21
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17396..18394
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76061.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_146_22
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18381..19853
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76062.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_007_122G1_scaffold_146_23
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19878..20087
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76063.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L1_007_122G1_scaffold_146_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20102..21790
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87226.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
oligoendopeptidase F
L1_007_122G1_scaffold_146_25

Not on your lists

comp(21902..22324)
DNA (423bp) protein (141aa)
Flavodoxin, short chain n=1 Tax=human gut metagenome RepID=K1UGR9_9ZZZZ
Flavodoxin, short chain {ECO:0000313|EMBL:EKC70606.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
flavodoxin, short chain
L1_007_122G1_scaffold_146_26
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22378..22938)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BXX3_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG50012.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L1_007_122G1_scaffold_146_27
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23340..24686
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Clostridium sp. D5 RepID=F0YT94_9CLOT
L1_007_122G1_scaffold_146_28
unknown

Not on your lists

24722..24883
DNA (162bp) protein (54aa)

This feature has no annotations

L1_007_122G1_scaffold_146_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24880..25560
DNA (681bp) protein (227aa)
Flavin reductase domain-containing protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QPU1_9CLOT
Flavin reductase domain-containing protein {ECO:0000313|EMBL:CDC37815.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
flavin reductase domain-containing protein
L1_007_122G1_scaffold_146_30
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25807..26661)
DNA (855bp) protein (285aa)
Transcriptional regulator AraC family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PEL3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE31697.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
transcriptional regulator, AraC family
Displaying items 1-30 of 86 in total

View Taxonomy