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L1_007_122G1_scaffold_174

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_174_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(135..929)
DNA (795bp) protein (265aa)
Nitrate ABC transporter ATP-binding protein NtrC n=2 Tax=Clostridium RepID=R5T7F8_9CLOT
Nitrate ABC transporter ATP-binding protein NtrC {ECO:0000313|EMBL:CCZ61820.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L1_007_122G1_scaffold_174_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(902..1672)
DNA (771bp) protein (257aa)
Taurine ABC transporter permease protein n=2 Tax=Clostridium RepID=R5TEU9_9CLOT
Taurine ABC transporter permease protein {ECO:0000313|EMBL:CCZ61819.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
tauC; taurine ABC transporter permease
L1_007_122G1_scaffold_174_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1686..2507)
DNA (822bp) protein (274aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase family protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T876_9CLOT
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase family protein {ECO:0000313|EMBL:CCZ61818.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_174_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2697..3992)
DNA (1296bp) protein (432aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EFC96421.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EFC96421.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AP36_9CLOT
L1_007_122G1_scaffold_174_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4092..4934)
DNA (843bp) protein (281aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Putative pyridoxal kinase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AP37_9CLOT
Phosphomethylpyrimidine kinase type-1
L1_007_122G1_scaffold_174_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4977..5564)
DNA (588bp) protein (196aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AP38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC96423.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_174_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5704..6351)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TCI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60974.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
thiamine pyrophosphokinase
L1_007_122G1_scaffold_174_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6348..7010)
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AP40_9CLOT
L1_007_122G1_scaffold_174_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7010..7885)
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AP41_9CLOT
ribosome small subunit-dependent GTPase A
L1_007_122G1_scaffold_174_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7895..10078)
DNA (2184bp) protein (728aa)
Kinase domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AP42_9CLOT
Kinase domain protein {ECO:0000313|EMBL:EFC96415.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
serine/threonine protein kinase with PASTA sensor(s)
L1_007_122G1_scaffold_174_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10075..10818)
DNA (744bp) protein (248aa)
Protein phosphatase 2C n=2 Tax=Clostridium RepID=D3AP43_9CLOT
Serine/threonine protein phosphatase 2C family {ECO:0000313|EMBL:CCZ60978.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
protein serine/threonine phosphatase
L1_007_122G1_scaffold_174_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10815..11876)
DNA (1062bp) protein (354aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Probable dual-specificity RNA methyltransferase RlmN n=3 Tax=Clostridium RepID=R5TCI7_9CLOT
radical SAM enzyme, Cfr family
L1_007_122G1_scaffold_174_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11882..13210)
DNA (1329bp) protein (443aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR04_9CLOT
sun protein
L1_007_122G1_scaffold_174_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13203..13919)
DNA (717bp) protein (239aa)
Neutral zinc metallopeptidase family protein n=2 Tax=Clostridium RepID=R5TPP6_9CLOT
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:EFC95753.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
peptidase membrane zinc metallopeptidase
L1_007_122G1_scaffold_174_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13923..14861)
DNA (939bp) protein (313aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR02_9CLOT
L1_007_122G1_scaffold_174_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14863..15357)
DNA (495bp) protein (165aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Peptide deformylase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T610_9CLOT
peptide deformylase
L1_007_122G1_scaffold_174_17
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15534..17762)
DNA (2229bp) protein (743aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Primosomal protein N n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TCJ3_9CLOT
primosomal protein N'
L1_007_122G1_scaffold_174_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17939..18802)
DNA (864bp) protein (288aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQZ9_9CLOT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFC95761.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_174_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18821..19684)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95760.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_174_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19719..20252)
DNA (534bp) protein (178aa)
Isochorismatase family protein {ECO:0000313|EMBL:EFC95759.1}; EC=3.-.-.- {ECO:0000313|EMBL:EFC95759.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Isochorismatase family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQZ7_9CLOT
nicotinamidase-like amidase
L1_007_122G1_scaffold_174_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20282..21274)
DNA (993bp) protein (331aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQZ6_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFC95758.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Acetyltransferase (GNAT) family.
L1_007_122G1_scaffold_174_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21291..21680)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AQZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95757.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_174_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21730..23100)
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Clostridium RepID=R5T4Z0_9CLOT
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
L1_007_122G1_scaffold_174_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23225..24694)
DNA (1470bp) protein (490aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASV6_9CLOT
UDP-N-acetylmuramyl tripeptide synthetase
L1_007_122G1_scaffold_174_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24706..26376)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ASV7_9CLOT
L1_007_122G1_scaffold_174_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26403..29261)
DNA (2859bp) protein (953aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T623_9CLOT
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:CCZ60993.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cell division protein FtsK
L1_007_122G1_scaffold_174_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29323..30138)
DNA (816bp) protein (272aa)
Peptidase S14 ClpP n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TCK5_9CLOT
Peptidase S14 ClpP {ECO:0000313|EMBL:CCZ60994.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
peptidase S14 ClpP
L1_007_122G1_scaffold_174_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30292..31587)
DNA (1296bp) protein (432aa)
Major facilitator superfamily MFS_1 n=2 Tax=Clostridium RepID=R5T4Z7_9CLOT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCZ60995.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
major facilitator superfamily protein
L1_007_122G1_scaffold_174_29
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31904..33061)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5TPT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60996.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_174_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33146..33541)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AMJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60997.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
Displaying items 1-30 of 68 in total

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