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L1_007_122G1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_214_1
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

288..1250
DNA (963bp) protein (321aa)
SAM dependent methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NIB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10935.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
L1_007_122G1_scaffold_214_2
unknown

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1431..1565
DNA (135bp) protein (45aa)

This feature has no annotations

L1_007_122G1_scaffold_214_3
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1868..4264)
DNA (2397bp) protein (799aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Endonuclease MutS2 n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DSN1_9FIRM
MutS2 family protein
L1_007_122G1_scaffold_214_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4340..5080)
DNA (741bp) protein (247aa)
DNA repair protein RecO n=2 Tax=Clostridium RepID=A7VUC1_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA repair protein RecO
L1_007_122G1_scaffold_214_5
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5288..6202)
DNA (915bp) protein (305aa)
Streptomycin adenylyltransferase {ECO:0000313|EMBL:EMS72129.1}; EC=2.7.7.- {ECO:0000313|EMBL:EMS72129.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Streptomycin adenylyltransferase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSG7_9CLOT
adenylyltransferase
L1_007_122G1_scaffold_214_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6234..7136)
DNA (903bp) protein (301aa)
GTPase Era n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTI5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
GTP-binding protein Era
L1_007_122G1_scaffold_214_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7480..7974)
DNA (495bp) protein (165aa)
Prokaryotic diacylglycerol kinase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MGQ3_9FIRM
Prokaryotic diacylglycerol kinase {ECO:0000313|EMBL:CCY90890.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
diacylglycerol kinase
L1_007_122G1_scaffold_214_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8078..8584)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Endoribonuclease YbeY n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6Z1_9FIRM
conserved hypothetical protein TIGR00043
L1_007_122G1_scaffold_214_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8571..9545)
DNA (975bp) protein (325aa)
PhoH family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVX4_9FIRM
PhoH family protein {ECO:0000313|EMBL:CDB41175.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L1_007_122G1_scaffold_214_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9850..11121
DNA (1272bp) protein (424aa)
GTPase Obg n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MZY5_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
GTP-binding protein Obg/CgtA
L1_007_122G1_scaffold_214_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11147..11578
DNA (432bp) protein (144aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Mini-ribonuclease 3 n=2 Tax=Clostridium RepID=A7VVP7_9CLOT
hypothetical protein
L1_007_122G1_scaffold_214_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11605..12555
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41245.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_214_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12772..13779
DNA (1008bp) protein (336aa)
Polysaccharide deacetylase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CD68_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EEC89272.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted xylanase/chitin deacetylase
L1_007_122G1_scaffold_214_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13908..15287)
DNA (1380bp) protein (460aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTM3_9FIRM
Multidrug transporter MatE {ECO:0000313|EMBL:KJF40185.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative efflux protein, MATE family
L1_007_122G1_scaffold_214_15
Bacillus circulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15539..16981)
DNA (1443bp) protein (481aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Bacillus circulans RepID=Q7X0Z0_BACCI
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:AAO88279.1}; TaxID=1397 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus circulans.;"
LPXTG-motif cell wall anchor domain-containing protein
L1_007_122G1_scaffold_214_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17107..17691
DNA (585bp) protein (195aa)
Transposase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSG1_CLOCD
Integrase {ECO:0000313|EMBL:KJF38121.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transposase
L1_007_122G1_scaffold_214_17
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

18493..18954
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A1R1_BIFAA
competence protein ComEA
Tax=RBG_13_Chloroflexi_54_8_curated
L1_007_122G1_scaffold_214_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19071..20486
DNA (1416bp) protein (472aa)
Alginate O-acetyltransferase AlgI family protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0B1_9FIRM
Alginate O-acetyltransferase AlgI family protein {ECO:0000313|EMBL:CCY90677.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Putative alginate O-acetyltransferase
L1_007_122G1_scaffold_214_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20505..21899
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IX21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42502.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_214_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22034..23776
DNA (1743bp) protein (581aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HX50_9FIRM
putative isomerase
L1_007_122G1_scaffold_214_21
unknown

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24064..24408
DNA (345bp) protein (115aa)

This feature has no annotations

L1_007_122G1_scaffold_214_22
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24538..25221
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZA0_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS22488.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
ABC transporter ATPase
L1_007_122G1_scaffold_214_23
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25277..27919
DNA (2643bp) protein (881aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZA1_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDS22489.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
L1_007_122G1_scaffold_214_24
unknown

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28016..29245
DNA (1230bp) protein (410aa)

This feature has no annotations

L1_007_122G1_scaffold_214_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29367..30512)
DNA (1146bp) protein (382aa)
Sodium ion-translocating decarboxylase, beta subunit n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LG18_9FIRM
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:EOS54692.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
oxaloacetate decarboxylase subunit beta
L1_007_122G1_scaffold_214_26
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30529..30948)
DNA (420bp) protein (140aa)
Biotin carboxyl carrier protein (EC:4.1.1.41 4.1.1.70)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NHM8_9CLOT
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:CDC11633.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L1_007_122G1_scaffold_214_27
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30964..31431)
DNA (468bp) protein (156aa)
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium sp. CAG:413 RepID=R6NTD3_9CLOT
Oxaloacetate decarboxylase gamma chain {ECO:0000313|EMBL:CDC11634.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L1_007_122G1_scaffold_214_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31450..32829)
DNA (1380bp) protein (460aa)
Conserved carboxylase region n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWQ8_9FIRM
Conserved carboxylase region {ECO:0000313|EMBL:CDB41465.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_214_29
unknown

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comp(33236..33598)
DNA (363bp) protein (121aa)

This feature has no annotations

L1_007_122G1_scaffold_214_30
unknown

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comp(33963..34157)
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 54 in total

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