ggKbase home page

L1_007_122G1_scaffold_222

Search features with annotation key words

Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_222_31
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31969..33510
DNA (1542bp) protein (514aa)
Xylose import ATP-binding protein XylG {ECO:0000256|HAMAP-Rule:MF_01722}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01722};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
D-xylose ABC transporter, ATP-binding protein n=4 Tax=Escherichia coli RepID=D7Y929_ECOLX
xylose transporter ATP-binding subunit
L1_007_122G1_scaffold_222_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33488..34669
DNA (1182bp) protein (394aa)
Xylose transport system permease protein XylH n=1077 Tax=Enterobacteriaceae RepID=XYLH_ECO57
xylH; Xylose ABC transporter, membrane component XylH
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KDZ38326.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L1_007_122G1_scaffold_222_33
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34747..35925
DNA (1179bp) protein (393aa)
Xylose operon regulatory protein n=1170 Tax=Enterobacteriaceae RepID=XYLR_ECO57
AraC family transcriptional regulator
Xylose operon regulatory protein {ECO:0000313|EMBL:EOV53591.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L1_007_122G1_scaffold_222_34
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36033..36857)
DNA (825bp) protein (275aa)
Protein bax n=1265 Tax=Enterobacteriaceae RepID=BAX_ECOLI
hypothetical protein
Bax protein {ECO:0000313|EMBL:ELI21021.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L1_007_122G1_scaffold_222_35
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37177..39207
DNA (2031bp) protein (677aa)
Periplasmic alpha-amylase n=21 Tax=Escherichia coli RepID=D7Y934_ECOLX
Alpha-amylase {ECO:0000313|EMBL:EOW28062.1}; TaxID=1182704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE108.;"
malS; alpha-amylase
L1_007_122G1_scaffold_222_36
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39385..40638
DNA (1254bp) protein (418aa)
Aminotransferase, class I/II n=46 Tax=Escherichia coli RepID=D7Y935_ECOLX
Valine-pyruvate aminotransferase {ECO:0000313|EMBL:ELD67038.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
avtA; valine--pyruvate transaminase
L1_007_122G1_scaffold_222_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40789..41262)
DNA (474bp) protein (158aa)
Electron transport protein n=213 Tax=Escherichia RepID=G0D602_ECOLX
ysaA; putative electron transport protein YsaA
Electron transporter HydN {ECO:0000313|EMBL:EFF04582.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
L1_007_122G1_scaffold_222_38
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41364..42212)
DNA (849bp) protein (283aa)
HTH-type transcriptional regulator YiaJ n=183 Tax=Escherichia RepID=YIAJ_ECOLI
yiaJ; putative DNA-binding transcriptional repressor
HTH-type transcriptional regulator yiaJ {ECO:0000313|EMBL:KDY51081.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L1_007_122G1_scaffold_222_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42413..43411
DNA (999bp) protein (333aa)
2,3-diketo-L-gulonate reductase {ECO:0000256|HAMAP-Rule:MF_00820}; Short=2,3-DKG reductase {ECO:0000256|HAMAP-Rule:MF_00820};; EC=1.1.1.130 {ECO:0000256|HAMAP-Rule:MF_00820};; 3-dehydro-L-gulonate 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00820}; TaxID=1405293 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ATCC BAA-2209.;"
2,3-diketo-L-gulonate reductase n=348 Tax=Enterobacteriaceae RepID=DLGD_ECO55
malate/L-lactate dehydrogenase
L1_007_122G1_scaffold_222_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43423..43890
DNA (468bp) protein (156aa)
Uncharacterized protein n=226 Tax=Escherichia coli RepID=B7L6Y8_ECO55
hypothetical protein
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:EIH44305.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L1_007_122G1_scaffold_222_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44008..44481
DNA (474bp) protein (158aa)
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM n=595 Tax=Enterobacteriaceae RepID=YIAM_ECOLI
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM {ECO:0000313|EMBL:END88152.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L1_007_122G1_scaffold_222_42
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44484..45761
DNA (1278bp) protein (426aa)
2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN n=445 Tax=Enterobacteriaceae RepID=YIAN_ECOLI
TRAP dicarboxylate transporter DctM subunit
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EFU34077.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L1_007_122G1_scaffold_222_43
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45774..46760
DNA (987bp) protein (329aa)
2,3-diketo-L-gulonate-binding periplasmic protein yiaO n=1 Tax=Escherichia coli P0302308.2 PF6_ECOLX">RepID=N3GPF6_ECOLX
TRAP dicarboxylate transporter subunit DctP
2,3-diketo-L-gulonate-binding periplasmic protein yiaO {ECO:0000313|EMBL:KEJ65830.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L1_007_122G1_scaffold_222_44
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46764..48260
DNA (1497bp) protein (499aa)
L-xylulose/3-keto-L-gulonate kinase {ECO:0000313|EMBL:KEN45059.1}; EC=2.7.1.53 {ECO:0000313|EMBL:KEN45059.1};; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C2.;"
L-xylulose/3-keto-L-gulonate kinase n=116 Tax=Escherichia coli RepID=LYXK_ECOLI
carbohydrate kinase FGGY
L1_007_122G1_scaffold_222_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48257..48919
DNA (663bp) protein (221aa)
sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase (EC:4.1.1.85)
3-dehydro-L-gulonate-6-phosphate decarboxylase n=4 Tax=Escherichia coli RepID=D7Y944_ECOLX
3-keto-L-gulonate-6-phosphate decarboxylase sgbH {ECO:0000313|EMBL:EOW02200.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L1_007_122G1_scaffold_222_46
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48912..49772
DNA (861bp) protein (287aa)
L-ribulose-5-phosphate 3-epimerase ulaE {ECO:0000313|EMBL:EGW86775.1}; EC=5.1.3.22 {ECO:0000313|EMBL:EGW86775.1};; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L-xylulose 5-phosphate 3-epimerase n=57 Tax=Escherichia coli RepID=M4JUC5_ECOLX
L-xylulose 5-phosphate 3-epimerase
L1_007_122G1_scaffold_222_47
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49766..50461
DNA (696bp) protein (232aa)
Ribulose 5-phosphate epimerase {ECO:0000313|EMBL:EZA33388.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EZA33388.1};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L-ribulose-5-phosphate 4-epimerase n=58 Tax=Enterobacteriaceae RepID=M4JR44_ECOLX
L-ribulose-5-phosphate 4-epimerase
L1_007_122G1_scaffold_222_48
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50493..51308)
DNA (816bp) protein (272aa)
Transcriptional regulator, AraC family n=14 Tax=Enterobacteriaceae RepID=D7Y947_ECOLX
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EID64194.1}; TaxID=1086030 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 5a str. M90T.;"
L1_007_122G1_scaffold_222_49
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51534..52934
DNA (1401bp) protein (467aa)
Glycoside/pentoside/hexuronide transporter n=6 Tax=Escherichia coli RepID=D7Y948_ECOLX
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EOW02204.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
permease
L1_007_122G1_scaffold_222_50
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52945..54915
DNA (1971bp) protein (657aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=D7Y949_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHJ19288.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L1_007_122G1_scaffold_222_51
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55045..55785)
DNA (741bp) protein (247aa)
Putative outer membrane protein YiaT n=315 Tax=Enterobacteriaceae RepID=YIAT_ECO57
putative outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ELC13659.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L1_007_122G1_scaffold_222_52
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55909..56883
DNA (975bp) protein (325aa)
Uncharacterized HTH-type transcriptional regulator YiaU n=324 Tax=Enterobacteriaceae RepID=YIAU_ECOLI
DNA-binding transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDK84491.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
L1_007_122G1_scaffold_222_53
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56880..58016)
DNA (1137bp) protein (379aa)
Inner membrane protein YiaV n=362 Tax=Bacteria RepID=YIAV_ECOLI
HlyD-family secretion protein
Inner membrane protein yiaV {ECO:0000313|EMBL:ELD95788.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L1_007_122G1_scaffold_222_54
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58022..58345)
DNA (324bp) protein (108aa)
Inner membrane protein YiaW n=442 Tax=Escherichia RepID=YIAW_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFI87848.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
L1_007_122G1_scaffold_222_55
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58459..58671
DNA (213bp) protein (71aa)
Uncharacterized protein n=263 Tax=Enterobacteriaceae RepID=A7ZTD5_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW02210.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L1_007_122G1_scaffold_222_56
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58890..60428)
DNA (1539bp) protein (513aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EFJ88714.1}; EC=1.2.1.- {ECO:0000313|EMBL:EFJ88714.1};; Flags: Fragment;; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
Aldehyde dehydrogenase (NAD) family protein (Fragment) n=1 Tax=Escherichia coli MS 84-1 RepID=D7XIV6_ECOLX
aldehyde dehydrogenase
L1_007_122G1_scaffold_222_57
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60593..61744)
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase II n=87 Tax=Enterobacteriaceae RepID=A7ZTD7_ECO24
alcohol dehydrogenase
Predicted Fe-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDP67635.1}; TaxID=1400022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D6-113.11.;"
L1_007_122G1_scaffold_222_58
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61934..63778)
DNA (1845bp) protein (615aa)
Selenocysteinyl-tRNA-specific translation factor n=65 Tax=Escherichia coli RepID=C8UIX8_ECO1A
Selenocysteinyl-tRNA-specific translation factor {ECO:0000313|EMBL:EJE94268.1}; TaxID=1165939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:H11 str. CVM9455.;"
selB; selenocysteinyl-tRNA-specific translation factor
L1_007_122G1_scaffold_222_59
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63775..65166)
DNA (1392bp) protein (464aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=573235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 (strain 11368 / EHEC).;"
L-seryl-tRNA(Sec) selenium transferase n=52 Tax=Escherichia coli RepID=C8TME3_ECO26
selA; selenocysteine synthase
L1_007_122G1_scaffold_222_60
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65264..65872)
DNA (609bp) protein (203aa)
Uncharacterized GST-like protein YibF n=1098 Tax=Enterobacteriaceae RepID=YIBF_ECOL6
glutathione S-transferase
Glutathione S-transferase, C-terminal domain protein {ECO:0000313|EMBL:EFJ73524.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Displaying items 31-60 of 60 in total

View Taxonomy