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L1_007_122G1_scaffold_222

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_222_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(146..253)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli cloneA_i1 RepID=G5KU37_ECOLX
ldrD3; toxic polypeptide, small
Small toxic polypeptide ldrD {ECO:0000313|EMBL:KDV40847.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L1_007_122G1_scaffold_222_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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729..2000
DNA (1272bp) protein (424aa)
Inner membrane transport protein YhjV n=197 Tax=Enterobacteriaceae RepID=YHJV_ECOLI
yhjV; transporter protein
Inner membrane transport protein YhjV {ECO:0000313|EMBL:EMX17944.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L1_007_122G1_scaffold_222_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2030..3034)
DNA (1005bp) protein (335aa)
Dipeptide transport ATP-binding protein DppF n=192 Tax=Escherichia RepID=DPPF_ECOLI
dppF; dipeptide transporter ATP-binding subunit
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein {ECO:0000313|EMBL:EZJ89357.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
L1_007_122G1_scaffold_222_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3031..4014)
DNA (984bp) protein (328aa)
Dipeptide transport ATP-binding protein DppD n=783 Tax=Enterobacteriaceae RepID=DPPD_ECO57
oligopeptide/dipeptide ABC transporter ATPase
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDV40840.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L1_007_122G1_scaffold_222_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4065..4811)
DNA (747bp) protein (249aa)
Dipeptide transport system permease protein dppC n=1 Tax=Escherichia coli P12b RepID=H9UY95_ECOLX
dppC; dipeptide transport system permease DppC
Dipeptide transport system permease protein dppC {ECO:0000313|EMBL:END88116.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L1_007_122G1_scaffold_222_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4821..5840)
DNA (1020bp) protein (340aa)
Dipeptide transport system permease protein DppB n=1144 Tax=Enterobacteriaceae RepID=DPPB_ECO57
dppB; dipeptide transport system permease DppB
Dipeptide ABC transporter, permease protein DppB {ECO:0000313|EMBL:EGI39341.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
L1_007_122G1_scaffold_222_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5991..7598)
DNA (1608bp) protein (536aa)
Dipeptide ABC transporter, periplasmic dipeptide-binding protein DppA n=25 Tax=Escherichia coli RepID=D7Y8Z9_ECOLX
Periplasmic dipeptide transporter {ECO:0000313|EMBL:EOW02162.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
dppA; dipeptide transporter
L1_007_122G1_scaffold_222_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8511..10202)
DNA (1692bp) protein (564aa)
Phosphoethanolamine transferase EptB n=160 Tax=Escherichia RepID=EPTB_ECOLI
Phosphoethanolamine transferase EptB {ECO:0000313|EMBL:AKA92729.1}; TaxID=941323 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli VR50.;"
hypothetical protein
L1_007_122G1_scaffold_222_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10526..11734)
DNA (1209bp) protein (403aa)
Uncharacterized MFS-type transporter YhjX n=168 Tax=Escherichia RepID=YHJX_ECOLI
oxalate/formate antiporter
Inner membrane protein yhjX {ECO:0000313|EMBL:EQY14947.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L1_007_122G1_scaffold_222_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11963..12661)
DNA (699bp) protein (233aa)
Uncharacterized protein n=49 Tax=Escherichia coli RepID=B2N7B8_ECOLX
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:EMX28818.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
yhjY; putative lipase
L1_007_122G1_scaffold_222_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12819..13382
DNA (564bp) protein (188aa)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:KDX85465.1}; EC=3.2.2.20 {ECO:0000313|EMBL:KDX85465.1};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
DNA-3-methyladenine glycosylase 1 n=121 Tax=Escherichia RepID=3MG1_ECOLI
tag; DNA-3-methyladenine glycosylase I
L1_007_122G1_scaffold_222_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..13819
DNA (441bp) protein (147aa)
Uncharacterized N-acetyltransferase YiaC n=147 Tax=Escherichia RepID=YIAC_ECOLI
N-acetyltransferase GCN5
Acetyltransferase family protein {ECO:0000313|EMBL:KEN94642.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L1_007_122G1_scaffold_222_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13788..16121)
DNA (2334bp) protein (778aa)
Biotin sulfoxide reductase n=3 Tax=Escherichia coli RepID=L3HY23_ECOLX
Biotin sulfoxide reductase {ECO:0000313|EMBL:ELD67015.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
molybdopterin guanine dinucleotide-containing S/N-oxide reductase
L1_007_122G1_scaffold_222_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16274..16933
DNA (660bp) protein (220aa)
Probable lipoprotein YiaD n=1128 Tax=Enterobacteriaceae RepID=YIAD_ECOLI
outer membrane lipoprotein
OmpA family protein {ECO:0000313|EMBL:EFK53176.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L1_007_122G1_scaffold_222_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17037..18011
DNA (975bp) protein (325aa)
tiaE; 2-oxo-carboxylic acid reductase (glyoxalate reductase) (2-ketoaldonate reductase) (EC:1.1.1.215 1.1.1.79 1.1.1.81)
Glyoxylate/hydroxypyruvate reductase B {ECO:0000256|HAMAP-Rule:MF_01667, ECO:0000256|SAAS:SAAS00010468}; EC=1.1.1.79 {ECO:0000256|HAMAP-Rule:MF_01667, ECO:0000256|SAAS:SAAS00010467};; EC=1.1.1.81 {ECO:0000256|HAMAP-Rule:MF_01667, ECO:0000256|SAAS:SAAS00010469};; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
Glyoxylate/hydroxypyruvate reductase B n=821 Tax=Enterobacteriaceae RepID=GHRB_ECO24
L1_007_122G1_scaffold_222_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18061..18771)
DNA (711bp) protein (237aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=L3I0I5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW02171.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
L1_007_122G1_scaffold_222_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19205..19495
DNA (291bp) protein (97aa)
Uncharacterized HTH-type transcriptional regulator YiaG n=1398 Tax=Enterobacteriaceae RepID=YIAG_ECO57
yiaG; putative transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CDK49153.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L1_007_122G1_scaffold_222_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19776..19988
DNA (213bp) protein (71aa)
Cold shock protein CspA n=2143 Tax=Bacteria RepID=CSPA_ECO57
cold-shock protein
Cold shock protein CspA {ECO:0000313|EMBL:EQY14956.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L1_007_122G1_scaffold_222_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20173..20385)
DNA (213bp) protein (71aa)
Hok/gef family protein n=6 Tax=Escherichia coli RepID=D7Y915_ECOLX
Protein HokA {ECO:0000313|EMBL:EOV53577.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hokA_2; putative membrane permeability altering protein,hypothetical protein,small toxic polypeptide,Hok/gef family
L1_007_122G1_scaffold_222_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20448..20792)
DNA (345bp) protein (115aa)
Integrase core domain protein n=1 Tax=Escherichia coli 3.2303 RepID=I2YGH3_ECOLX
insJK-3; IS150 protein InsAB
Transposase {ECO:0000313|EMBL:EOV69948.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L1_007_122G1_scaffold_222_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21275..21796)
DNA (522bp) protein (174aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=D7Y917_ECOLX
Transposase {ECO:0000313|EMBL:ELD67023.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
Insertion element IS150 protein
L1_007_122G1_scaffold_222_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22096..24165)
DNA (2070bp) protein (690aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=23 Tax=Escherichia coli RepID=D7Y920_ECOLX
L1_007_122G1_scaffold_222_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24175..25086)
DNA (912bp) protein (304aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
Glycine--tRNA ligase alpha subunit n=1338 Tax=Enterobacteriaceae RepID=SYGA_CITK8
glyQ; glycyl-tRNA synthetase alpha subunit GlyQ
L1_007_122G1_scaffold_222_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25181..25480)
DNA (300bp) protein (100aa)
Uncharacterized lipoprotein YsaB n=351 Tax=Enterobacteriaceae RepID=YSAB_SHIBS
ysaB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD27103.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L1_007_122G1_scaffold_222_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25655..26650
DNA (996bp) protein (332aa)
Inner membrane protein YiaH n=161 Tax=Enterobacteriaceae RepID=YIAH_ECOLI
yiaH; hypothetical protein
Putative inner membrane protein {ECO:0000313|EMBL:EID68471.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L1_007_122G1_scaffold_222_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26692..27129)
DNA (438bp) protein (146aa)
Uncharacterized protein n=15 Tax=Enterobacteriaceae RepID=C3SN52_ECOLX
YiaAB two helix domain-containing protein
YiaA/B two helix domain protein {ECO:0000313|EMBL:ESD65609.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L1_007_122G1_scaffold_222_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27175..27516)
DNA (342bp) protein (114aa)
Inner membrane protein YiaB n=184 Tax=Escherichia RepID=YIAB_ECOLI
yiaB; hypothetical protein
Inner membrane protein yiaB {ECO:0000313|EMBL:KDY51069.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L1_007_122G1_scaffold_222_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27685..29139)
DNA (1455bp) protein (485aa)
Xylulokinase n=4 Tax=Escherichia coli RepID=D7Y926_ECOLX
Xylulose kinase {ECO:0000313|EMBL:EOV53586.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
xylulokinase
L1_007_122G1_scaffold_222_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29211..30533)
DNA (1323bp) protein (441aa)
xylose isomerase (EC:5.3.1.5)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
Xylose isomerase n=678 Tax=Enterobacteriaceae RepID=XYLA_ECO27
L1_007_122G1_scaffold_222_30
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30899..31891
DNA (993bp) protein (331aa)
D-xylose transporter subunit XylF n=141 Tax=Enterobacteriaceae RepID=I0VJ95_SHIFL
xylF; D-xylose transporter subunit XylF
D-xylose ABC transporter, D-xylose-binding protein {ECO:0000313|EMBL:EIQ03805.1}; TaxID=766158 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2850-71.;"
Displaying items 1-30 of 60 in total

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