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L1_007_122G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_239_1
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..106
DNA (105bp) protein (35aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AM71_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L1_007_122G1_scaffold_239_2
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

759..890
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N866_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18004.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_122G1_scaffold_239_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1196..1495
DNA (300bp) protein (100aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N865_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93646.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L1_007_122G1_scaffold_239_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1534..2361)
DNA (828bp) protein (276aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=5 Tax=Erysipelotrichaceae RepID=B0N864_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46030.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative oxidoreductase
L1_007_122G1_scaffold_239_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2609..3598
DNA (990bp) protein (330aa)
ROK family protein n=4 Tax=Erysipelotrichaceae RepID=B0N863_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93648.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ROK family protein
L1_007_122G1_scaffold_239_6
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4082..4552
DNA (471bp) protein (157aa)
RbsD/FucU transport family protein n=2 Tax=Erysipelotrichaceae RepID=B0N861_9FIRM
RbsD/FucU transport family protein {ECO:0000313|EMBL:EDS17999.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
D-ribose pyranase
L1_007_122G1_scaffold_239_7
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4555..5115
DNA (561bp) protein (187aa)
Bacterial transferase hexapeptide repeat protein n=4 Tax=Erysipelotrichaceae RepID=B0N860_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EDS17998.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
acetyltransferase
L1_007_122G1_scaffold_239_8
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5259..5756
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=5 Tax=Erysipelotrichaceae RepID=B0N859_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCZ32244.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
MarR family transcriptional regulator
L1_007_122G1_scaffold_239_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5753..6163
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N858_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46025.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
putative flavodoxin
L1_007_122G1_scaffold_239_10
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6154..6861
DNA (708bp) protein (236aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70)
Pseudouridine synthase n=3 Tax=Coprobacillus RepID=C3RHV5_9FIRM
L1_007_122G1_scaffold_239_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6979..8307
DNA (1329bp) protein (443aa)
MATE efflux family protein n=3 Tax=Coprobacillus RepID=C3RHV7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ32247.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
MATE efflux family protein
L1_007_122G1_scaffold_239_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8496..8984)
DNA (489bp) protein (163aa)
Heptaprenyl diphosphate synthase component I n=5 Tax=Erysipelotrichaceae RepID=B0N854_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32248.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted membrane protein
L1_007_122G1_scaffold_239_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8994..9353)
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=B0N853_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32249.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L1_007_122G1_scaffold_239_14
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9382..10356
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93657.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L1_007_122G1_scaffold_239_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10428..11228
DNA (801bp) protein (267aa)
Cof-like hydrolase n=3 Tax=Erysipelotrichaceae RepID=B0N851_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EHM93658.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cof family hydrolase
L1_007_122G1_scaffold_239_16
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11381..12430
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
D-alanine--D-alanine ligase n=3 Tax=Erysipelotrichaceae RepID=B0N850_9FIRM
vanG; D-alanine:D-alanine ligase
L1_007_122G1_scaffold_239_17
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12408..13160
DNA (753bp) protein (251aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=C3RHW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32252.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
D,D-peptidase/D,D-carboxypeptidase
L1_007_122G1_scaffold_239_18
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13123..14187
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N848_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17986.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
alanine racemase
L1_007_122G1_scaffold_239_19
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14147..15277
DNA (1131bp) protein (377aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Alanine racemase n=4 Tax=Erysipelotrichaceae RepID=G9QXP7_9FIRM
amino acid racemase
L1_007_122G1_scaffold_239_20
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15300..16490
DNA (1191bp) protein (397aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N846_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCZ32255.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
D-alanyl-D-alanine carboxypeptidase
L1_007_122G1_scaffold_239_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16570..17031
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RHW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93664.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
L1_007_122G1_scaffold_239_22
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17203..20439
DNA (3237bp) protein (1079aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1AMM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46012.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
SWF/SNF family helicase
L1_007_122G1_scaffold_239_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20727..21383
DNA (657bp) protein (219aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RHW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32258.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L1_007_122G1_scaffold_239_24
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21431..22162
DNA (732bp) protein (244aa)
Transcriptional regulator, RpiR family n=4 Tax=Erysipelotrichaceae RepID=B0N842_9FIRM
Phosphosugar-binding transcriptional regulator {ECO:0000313|EMBL:CCZ32259.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
RpiR family transcriptional regulator
L1_007_122G1_scaffold_239_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22309..24195
DNA (1887bp) protein (629aa)
Heat-responsive suppressor HrsA {ECO:0000313|EMBL:EDS17979.1}; EC=2.7.1.- {ECO:0000313|EMBL:EDS17979.1};; EC=2.7.1.69 {ECO:0000313|EMBL:EDS17979.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
mngA; PTS system, 2-O-a-mannosyl-D-glycerate-specificIIABC component (EC:2.7.1.69)
Heat-responsive suppressor HrsA n=2 Tax=Erysipelotrichaceae RepID=B0N841_9FIRM
L1_007_122G1_scaffold_239_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24206..26773
DNA (2568bp) protein (856aa)
mngB; Alpha-mannosidase (EC:3.2.1.24)
Glycosyl hydrolase family 38 N-terminal domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N840_9FIRM
Glycosyl hydrolase family 38 N-terminal domain protein {ECO:0000313|EMBL:EDS17978.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L1_007_122G1_scaffold_239_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26878..28128
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RHX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32262.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
metallo-beta-lactamase
L1_007_122G1_scaffold_239_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28143..29048
DNA (906bp) protein (302aa)
NAD dependent epimerase/dehydratase family protein n=2 Tax=Erysipelotrichaceae RepID=B0N838_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93671.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
dTDP-glucose 4,6-dehydratase
L1_007_122G1_scaffold_239_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29087..29416
DNA (330bp) protein (110aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=C3RHX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32264.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
MFS transporter
L1_007_122G1_scaffold_239_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29633..30073
DNA (441bp) protein (147aa)
Acetyltransferase, GNAT family n=4 Tax=Erysipelotrichaceae RepID=B0N836_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32265.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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