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L1_007_122G1_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_263_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..486)
DNA (486bp) protein (162aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Release factor glutamine methyltransferase n=2 Tax=Bifidobacterium breve RepID=H3L1Q8_BIFBR
Peptide release factor-glutamine N5-methyltransferase
L1_007_122G1_scaffold_263_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(629..1717)
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=6 Tax=Bifidobacterium breve RepID=F6C6P3_BIFBA
prfA; Bacterial Peptide Chain Release Factor 1 (RF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_263_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1827..2039)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=26 Tax=Bifidobacterium RepID=RL31_BIFLD
rpmE2; LSU ribosomal protein L31P
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_263_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2491..2940
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CS98_BIFBR
Multidrug resistance protein B
Uncharacterized protein {ECO:0000313|EMBL:ERI87400.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_263_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3040..3831)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CRZ3_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ19851.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_263_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4220..4639)
DNA (420bp) protein (140aa)
Peptide deformylase n=3 Tax=Bifidobacterium breve RepID=F6C6P7_BIFBA
Peptide deformylase
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_263_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4639..5487)
DNA (849bp) protein (283aa)
2,5-diketo-D-gluconic acid reductase n=2 Tax=Bifidobacterium breve RepID=F9Y2S4_BIFBU
2,5-diketo-D-gluconic acid reductase
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:BAR00562.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_263_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5921..6445)
DNA (525bp) protein (175aa)
Transcriptional regulator, MarR family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C9Y7_BIFBR
Hypothetical protein, marR family
Uncharacterized protein {ECO:0000313|EMBL:AHJ21650.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_263_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6708..7658)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZGF4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75823.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Glucokinase/Xylose repressor
L1_007_122G1_scaffold_263_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8194..9933)
DNA (1740bp) protein (580aa)
multidrug transporter n=1 Tax=Bifidobacterium breve RepID=UPI0003684564
putative membrane spanning protein, MFS member
Putative membrane spanning protein, MFS member {ECO:0000313|EMBL:AHJ21652.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_263_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10047..10271)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTB1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87293.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_263_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10534..12213
DNA (1680bp) protein (560aa)
ChvD family ATP-binding cassette protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZN58_BIFBR
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:EPD75825.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP-binding protein of ABC transporter system
L1_007_122G1_scaffold_263_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12430..13335
DNA (906bp) protein (302aa)
Acyl-CoA thioesterase {ECO:0000313|EMBL:ABE96162.1}; EC=3.1.2.- {ECO:0000313|EMBL:ABE96162.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
acyl-CoA thioesterase n=1 Tax=Bifidobacterium breve RepID=UPI00031C1FEA
Acyl-CoA thioesterase
L1_007_122G1_scaffold_263_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13376..13903)
DNA (528bp) protein (176aa)
Conserved hypothetical membrane spanning protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2T0_BIFBU
Conserved hypothetical membrane spanning protein
Conserved hypothetical membrane spanning protein {ECO:0000313|EMBL:ABE96163.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_263_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13998..15608)
DNA (1611bp) protein (537aa)
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2T1_BIFBU
sulD; Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABE96164.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_263_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15725..16600)
DNA (876bp) protein (292aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
dihydropteroate synthase n=1 Tax=Bifidobacterium breve RepID=UPI0002D3D174
Dihydropteroate synthase
L1_007_122G1_scaffold_263_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16798..17457)
DNA (660bp) protein (220aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
GTP cyclohydrolase 1 n=5 Tax=Bifidobacterium breve RepID=F6C6Q9_BIFBA
folE; GTP cyclohydrolase I
L1_007_122G1_scaffold_263_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17554..19650)
DNA (2097bp) protein (699aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
ATPase AAA n=1 Tax=Bifidobacterium breve RepID=UPI00030A0A76
Cell division protein ftsH
L1_007_122G1_scaffold_263_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19647..20210)
DNA (564bp) protein (188aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFE88668.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFE88668.1};; Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:BAR00574.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypoxanthine phosphoribosyltransferase n=3 Tax=Bifidobacterium breve RepID=F6C6R1_BIFBA
Hypoxanthine-guanine phosphoribosyltransferase
L1_007_122G1_scaffold_263_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20197..21348)
DNA (1152bp) protein (384aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
tRNA(Ile)-lysidine synthase n=3 Tax=Bifidobacterium breve RepID=F6C6R2_BIFBA
tRNA(Ile)-lysidine synthetase TilS
L1_007_122G1_scaffold_263_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21384..22880)
DNA (1497bp) protein (499aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bifidobacterium breve RepID=UPI0002F7E78C
putative secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain
Putative secreted protein with D-Ala-D-Ala carboxypeptidase 3 (S13) domain {ECO:0000313|EMBL:AHJ21662.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_263_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22905..24575)
DNA (1671bp) protein (557aa)
ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI000303796D
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EFE88665.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_263_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24575..25570)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZHD5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75836.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP-binding protein of ABC transporter system
L1_007_122G1_scaffold_263_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26081..27304)
DNA (1224bp) protein (408aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Bifidobacterium breve RepID=F6C6R6_BIFBA
N-acetylglucosaminyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD75837.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_263_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27304..28896)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CTC5_BIFBR
Hypothetical membrane spanning protein with DUF20 domain
Uncharacterized protein {ECO:0000313|EMBL:ERI87308.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_263_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28974..29900
DNA (927bp) protein (309aa)
Glycosyltransferase, group 2 family protein n=3 Tax=Bifidobacterium breve RepID=D4BR16_BIFBR
Glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPD75839.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_263_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30036..31187)
DNA (1152bp) protein (384aa)
Lactaldehyde reductase {ECO:0000313|EMBL:AEF26466.1}; EC=1.1.1.77 {ECO:0000313|EMBL:AEF26466.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Lactaldehyde reductase n=5 Tax=Bifidobacterium breve RepID=F6C6R9_BIFBA
Lactaldehyde reductase
L1_007_122G1_scaffold_263_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31539..32843
DNA (1305bp) protein (435aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AEF27676.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AEF27676.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=3 Tax=Bifidobacterium breve RepID=F6C6S0_BIFBA
Cyclopropane-fatty-acyl-phospholipid synthase
L1_007_122G1_scaffold_263_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33384..34253
DNA (870bp) protein (290aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Bifidobacterium breve RepID=F6C6S1_BIFBA
tRNA (m(7)G46) methyltransferase
L1_007_122G1_scaffold_263_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34358..34834)
DNA (477bp) protein (159aa)
Xre transcriptional regulator n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2U6_BIFBU
Xre transcriptional regulator
Xre transcriptional regulator {ECO:0000313|EMBL:AEJ80226.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Displaying items 1-30 of 48 in total

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