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L1_007_122G1_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_269_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..104)
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71924.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_269_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70..1308)
DNA (1239bp) protein (413aa)
Sulfite reductase, beta subunit (hemoprotein) (EC:1.7.7.1)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65178.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_269_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1275..1460)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65178.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_269_4
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1991..2341)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX2_9FIRM
Cupin {ECO:0000313|EMBL:KJF41263.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Cupin domain.
L1_007_122G1_scaffold_269_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2521..2958
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65176.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L1_007_122G1_scaffold_269_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2990..3859
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65175.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_269_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3906..4235
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65174.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_269_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4313..4894)
DNA (582bp) protein (194aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW6_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EHL65574.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phosphatidylglycerophosphate synthase
L1_007_122G1_scaffold_269_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5054..5815
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65573.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_269_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5921..6934)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW4_9FIRM
Lysophospholipase {ECO:0000313|EMBL:KJF38514.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
alpha/beta fold family hydrolase
L1_007_122G1_scaffold_269_11
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6949..9051)
DNA (2103bp) protein (701aa)
Glycosyl hydrolase family 9 n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PSB7_9BACE
Glycosyl hydrolase family 9 {ECO:0000313|EMBL:EGF57571.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
glycoside hydrolase family protein
L1_007_122G1_scaffold_269_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9060..9272)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65570.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_269_13
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9575..10225)
DNA (651bp) protein (217aa)
HAD hydrolase, family IA n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW1_9FIRM
Hydrolase {ECO:0000313|EMBL:KJF38515.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
HAD-superfamily hydrolase
L1_007_122G1_scaffold_269_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10239..10499)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65568.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
2,3-diketo-L-gulonate reductase
L1_007_122G1_scaffold_269_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10460..11239)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65568.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
2,3-diketo-L-gulonate reductase
L1_007_122G1_scaffold_269_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11405..12292)
DNA (888bp) protein (296aa)
DegV family EDD domain-containing protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV9_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:EHL65567.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
degV family protein
L1_007_122G1_scaffold_269_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12735..13433
DNA (699bp) protein (233aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV8_9FIRM
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EHL65566.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
nicotinamide mononucleotide transporter PnuC
L1_007_122G1_scaffold_269_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13526..14194)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV7_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:KJF39208.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_269_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14191..16101)
DNA (1911bp) protein (637aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65564.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
nucleoside-binding protein
L1_007_122G1_scaffold_269_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16269..16961
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65563.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
PHP domain-containing protein
L1_007_122G1_scaffold_269_21
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17036..19366)
DNA (2331bp) protein (777aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV4_9FIRM
ABC transporter ATPase {ECO:0000313|EMBL:KJF39211.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ATPases with chaperone activity, ATP-binding subunit
L1_007_122G1_scaffold_269_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19398..20081)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39212.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_269_23
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20143..21459)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39213.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_269_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21487..22275)
DNA (789bp) protein (263aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV1_9FIRM
L1_007_122G1_scaffold_269_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22312..23130)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXV0_9FIRM
Transporter {ECO:0000313|EMBL:KJF39215.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L1_007_122G1_scaffold_269_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23131..24000)
DNA (870bp) protein (290aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXU9_9FIRM
ABC-type cobalt transport system, ATPase component
L1_007_122G1_scaffold_269_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23985..24881)
DNA (897bp) protein (299aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXU8_9FIRM
ABC-type cobalt transport system, ATPase component
L1_007_122G1_scaffold_269_28
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24991..25869)
DNA (879bp) protein (293aa)
Predicted SAM-dependent methyltransferases (EC:2.1.1.64 2.1.1.-)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXU7_9FIRM
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJF39217.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_269_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25944..27293)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXU6_9FIRM
L1_007_122G1_scaffold_269_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27406..28470)
DNA (1065bp) protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXU5_9FIRM
Holliday junction DNA helicase, RuvB subunit
Displaying items 1-30 of 52 in total

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