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L1_007_122G1_scaffold_280

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_280_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..350)
DNA (348bp) protein (116aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=C7H3I8_9FIRM
DNA ligase N terminus./Helix-turn-helix.
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU97553.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_007_122G1_scaffold_280_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

835..1023
DNA (189bp) protein (63aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=A8R8V5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN42103.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L1_007_122G1_scaffold_280_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1020..1361
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=C9YMH5_CLODR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN78906.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L1_007_122G1_scaffold_280_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1354..1650
DNA (297bp) protein (99aa)
Uncharacterized protein n=9 Tax=Firmicutes RepID=A7VXZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFB76268.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_007_122G1_scaffold_280_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1949..2278
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EIR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ56486.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_007_122G1_scaffold_280_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2467..4047
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78582.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
plasmid mobilization system relaxase
L1_007_122G1_scaffold_280_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4114..4749
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78581.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DNA primase
L1_007_122G1_scaffold_280_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4718..6055
DNA (1338bp) protein (446aa)
Virulence-associated protein E n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHD5_9FIRM
Virulence-associated protein E {ECO:0000313|EMBL:EDP20533.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted P-loop ATPase and inactivated derivatives
L1_007_122G1_scaffold_280_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6297..6494
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5ZNR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM88510.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L1_007_122G1_scaffold_280_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6495..8165
DNA (1671bp) protein (557aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BPR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETD20444.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_122G1_scaffold_280_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8263..9132
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98589.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9150..9557
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98590.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
conjugative transposon protein
L1_007_122G1_scaffold_280_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9502..11940
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98591.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11937..12833
DNA (897bp) protein (299aa)
Site-specific DNA methylase (EC:2.1.1.37)
C-5 cytosine-specific DNA methylase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW4_9CLOT
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:EFC98592.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_280_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13112..13693
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98593.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
conserved hypothetical protein
L1_007_122G1_scaffold_280_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13668..15749
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98594.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15777..16034
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98595.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16024..16731
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98596.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16986..17663
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98598.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_280_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17730..19814
DNA (2085bp) protein (695aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
topB; DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium difficile P61 RepID=T4SGD6_CLODI
L1_007_122G1_scaffold_280_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19952..23041
DNA (3090bp) protein (1030aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98581.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
L1_007_122G1_scaffold_280_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23046..23996
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98582.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_23
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23999..24205
DNA (207bp) protein (69aa)
Uncharacterized protein n=31 Tax=Firmicutes RepID=A8RSQ7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS21612.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L1_007_122G1_scaffold_280_24
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24202..24567
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=A7VXX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59398.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
conjugative transposon protein
L1_007_122G1_scaffold_280_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24738..25439)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98557.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_280_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25444..25842)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC98558.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
DNA-dependent DNA polymerase III subunit alpha
L1_007_122G1_scaffold_280_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25926..27275)
DNA (1350bp) protein (450aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHX9_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFC98559.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Relaxase/Mobilisation nuclease domain.
L1_007_122G1_scaffold_280_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27236..27565)
DNA (330bp) protein (110aa)
Bacterial mobilization protein MobC n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHY0_9CLOT
Bacterial mobilization protein MobC {ECO:0000313|EMBL:EFC98560.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
mobilization protein
L1_007_122G1_scaffold_280_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27739..28098)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHY1_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFC98561.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L1_007_122G1_scaffold_280_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28201..29148)
DNA (948bp) protein (316aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AHY2_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFC98562.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
Displaying items 1-30 of 65 in total

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