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L1_007_122G1_scaffold_291

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_291_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(95..1123)
DNA (1029bp) protein (343aa)
Starvation sensing protein n=37 Tax=Escherichia coli RepID=D2NIK6_ECOS5
mandelate racemase/muconate lactonizing protein
Starvation-sensing protein RspA {ECO:0000313|EMBL:ESD27490.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L1_007_122G1_scaffold_291_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1329..1655)
DNA (327bp) protein (109aa)
UPF0060 membrane protein YnfA n=45 Tax=Enterobacteriaceae RepID=YNFA_SHIF8
ynfA; membrane protein ynfA
UPF0060 membrane protein YnfA {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L1_007_122G1_scaffold_291_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1790..2131
DNA (342bp) protein (114aa)
UPF0482 protein YnfB n=335 Tax=Enterobacteriaceae RepID=YNFB_ECO24
ynfB; hypothetical protein
UPF0482 protein YnfB {ECO:0000256|HAMAP-Rule:MF_01581}; Flags: Precursor;; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L1_007_122G1_scaffold_291_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2166..2726
DNA (561bp) protein (187aa)
speG; spermidine N1-acetyltransferase (EC:2.3.1.57)
Spermidine N(1)-acetyltransferase {ECO:0000313|EMBL:EMX39896.1}; EC=2.3.1.57 {ECO:0000313|EMBL:EMX39896.1};; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
Spermidine N(1)-acetyltransferase n=643 Tax=Enterobacteriaceae RepID=ATDA_ECO57
L1_007_122G1_scaffold_291_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2729..3475)
DNA (747bp) protein (249aa)
UPF0257 lipoprotein YnfC n=464 Tax=Enterobacteriaceae RepID=J7Q7L1_ECOLX
hypothetical protein
UPF0257 lipoprotein YnfC {ECO:0000256|HAMAP-Rule:MF_01065}; Flags: Precursor;; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L1_007_122G1_scaffold_291_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3547..3852
DNA (306bp) protein (102aa)
Uncharacterized protein YnfD n=167 Tax=Escherichia RepID=YNFD_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZK00611.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
L1_007_122G1_scaffold_291_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4051..6477
DNA (2427bp) protein (809aa)
Putative dimethyl sulfoxide reductase chain ynfE {ECO:0000313|EMBL:EHU23965.1}; EC=1.8.99.- {ECO:0000313|EMBL:EHU23965.1};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Oxidoreductase n=2 Tax=Escherichia coli RepID=T6BZX1_ECOLX
ynfF; oxidoreductase subunit
L1_007_122G1_scaffold_291_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6488..7105
DNA (618bp) protein (206aa)
Probable anaerobic dimethyl sulfoxide reductase chain YnfG n=1191 Tax=Enterobacteriaceae RepID=YNFG_ECOL6
putative dimethyl sulfoxide reductase Fe-S subunit
Anaerobic dimethyl sulfoxide reductase chain B {ECO:0000313|EMBL:EOU78533.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
L1_007_122G1_scaffold_291_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7107..7961
DNA (855bp) protein (285aa)
DMSO reductase, anchor subunit DmsC n=29 Tax=Escherichia coli RepID=D7Y4L4_ECOLX
DMSO reductase anchor subunit family protein {ECO:0000313|EMBL:EMX19427.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
DMSO reductase anchor subunit DmsC
L1_007_122G1_scaffold_291_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8004..8618
DNA (615bp) protein (205aa)
Tat proofreading chaperone DmsD n=797 Tax=Enterobacteriaceae RepID=DMSD_ECO57
Tat proofreading chaperone DmsD {ECO:0000256|HAMAP-Rule:MF_00940}; DMSO reductase maturation protein {ECO:0000256|HAMAP-Rule:MF_00940}; Twin-arginine leader-binding protein DmsD {ECO:0000256|HAMAP-Rule:MF_00940}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
twin-argninine leader-binding protein DmsD
L1_007_122G1_scaffold_291_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8813..10069
DNA (1257bp) protein (419aa)
Voltage-gated ClC-type chloride channel ClcB n=4 Tax=Escherichia coli RepID=D7Y4L2_ECOLX
Voltage-gated ClC-type chloride channel ClcB {ECO:0000256|HAMAP-Rule:MF_01203}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
clcB; predicted voltage-gated chloride channel
L1_007_122G1_scaffold_291_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10022..10717)
DNA (696bp) protein (232aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=868160 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6A.;"
ATP-dependent dethiobiotin synthetase BioD 2 n=701 Tax=Enterobacteriaceae RepID=BIOD2_ECO57
ynfK; putative dithiobiotin synthetase
L1_007_122G1_scaffold_291_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10842..12062)
DNA (1221bp) protein (407aa)
Protein mlc n=136 Tax=Escherichia RepID=MLC_ECOLI
ROK family protein
Protein mlc {ECO:0000313|EMBL:EZJ76656.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
L1_007_122G1_scaffold_291_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12197..13090)
DNA (894bp) protein (298aa)
LysR substrate binding domain protein n=3 Tax=Escherichia coli RepID=D7Y4K9_ECOLX
Transcriptional regulator YnfL {ECO:0000313|EMBL:EOW07444.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
LysR family transcriptional regulator
L1_007_122G1_scaffold_291_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13197..14450
DNA (1254bp) protein (418aa)
Inner membrane transport protein YnfM n=363 Tax=Enterobacteriaceae RepID=YNFM_ECOLI
major facilitator superfamily protein
Major facilitator family transporter {ECO:0000313|EMBL:ABV20986.1}; TaxID=331111 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O139:H28 (strain E24377A / ETEC).;"
L1_007_122G1_scaffold_291_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14874..15182
DNA (309bp) protein (103aa)
Acid shock protein n=219 Tax=Escherichia coli RepID=ASR_ECO57
acid shock protein
Acid shock protein {ECO:0000256|HAMAP-Rule:MF_00546}; Flags: Precursor;; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L1_007_122G1_scaffold_291_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15458..16279
DNA (822bp) protein (274aa)
Uncharacterized protein n=42 Tax=Enterobacteriaceae RepID=Q3Z1V1_SHISS
hypothetical protein
Trypsin family protein {ECO:0000313|EMBL:ENH02602.1}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.5.;"
L1_007_122G1_scaffold_291_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16318..16647)
DNA (330bp) protein (110aa)
Spermidine export protein MdtI n=1136 Tax=Enterobacteriaceae RepID=MDTI_ECO24
small multidrug resistance protein
Spermidine export protein MdtI {ECO:0000256|HAMAP-Rule:MF_01597, ECO:0000256|SAAS:SAAS00166084}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L1_007_122G1_scaffold_291_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16634..16999)
DNA (366bp) protein (122aa)
Spermidine export protein MdtJ n=1151 Tax=Enterobacteriaceae RepID=MDTJ_ECO24
small multidrug resistance protein
Spermidine export protein MdtJ {ECO:0000256|HAMAP-Rule:MF_01598, ECO:0000256|SAAS:SAAS00166061}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L1_007_122G1_scaffold_291_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17411..18445
DNA (1035bp) protein (345aa)
Autoinducer 2 exporter TqsA n=1 Tax=Escherichia coli 99.0741 RepID=V6FTG1_ECOLX
tqsA; putative transport protein
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:EZA28458.1}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L1_007_122G1_scaffold_291_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18470..19858)
DNA (1389bp) protein (463aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
NAD(P) transhydrogenase subunit beta n=1212 Tax=Bacteria RepID=PNTB_ECO57
hypothetical protein
L1_007_122G1_scaffold_291_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19869..21401)
DNA (1533bp) protein (511aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
NAD(P) transhydrogenase subunit alpha n=334 Tax=Enterobacteriaceae RepID=E8Y8B2_ECOKO
L1_007_122G1_scaffold_291_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21925..22869
DNA (945bp) protein (315aa)
Protein ydgH n=968 Tax=Enterobacteriaceae RepID=C3T982_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG56591.1}; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
L1_007_122G1_scaffold_291_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23055..24437
DNA (1383bp) protein (461aa)
Putative arginine/ornithine antiporter n=804 Tax=Bacteria RepID=ARCD_ECOL6
arginine/ornithine antiporter
Putative arginine/ornithine antiporter {ECO:0000313|EMBL:EMX39917.1}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
L1_007_122G1_scaffold_291_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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24474..25196
DNA (723bp) protein (241aa)
Dihydrofolate reductase FolM n=3 Tax=Escherichia coli RepID=D7Y4J6_ECOLX
Dihydrofolate reductase folM {ECO:0000313|EMBL:EOW07455.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
short chain dehydrogenase
L1_007_122G1_scaffold_291_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25193..25528)
DNA (336bp) protein (112aa)
Inner membrane protein YdgC n=859 Tax=Enterobacteriaceae RepID=YDGC_ECO57
ydgC; inner membrane protein ydgC
Inner membrane protein ydgC {ECO:0000313|EMBL:EIF86231.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L1_007_122G1_scaffold_291_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25657..26376
DNA (720bp) protein (240aa)
Transcriptional regulator n=1 Tax=Escherichia coli ATCC BAA-2193 RepID=V4VX63_ECOLX
rstA; DNA-binding response regulator RstA in two-component regulatory system with RstB
Transcriptional regulatory protein RstA {ECO:0000313|EMBL:EFK49166.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L1_007_122G1_scaffold_291_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26380..27681
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Sensory histidine kinase in two-component regulatory system with RstA n=114 Tax=Escherichia coli RepID=B7L5G1_ECO55
sensor protein RstB
L1_007_122G1_scaffold_291_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27757..28686
DNA (930bp) protein (310aa)
DNA replication terminus site-binding protein n=199 Tax=Enterobacteriaceae RepID=TUS_ECO27
DNA replication terminus site-binding protein
DNA replication terminus site-binding protein {ECO:0000256|HAMAP-Rule:MF_00483}; Short=Ter-binding protein {ECO:0000256|HAMAP-Rule:MF_00483};; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
L1_007_122G1_scaffold_291_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28683..30086)
DNA (1404bp) protein (468aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C3.;"
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=24 Tax=Escherichia coli RepID=D7Y4J1_ECOLX
Displaying items 1-30 of 43 in total

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