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L1_007_122G1_scaffold_297

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_297_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

193..1065
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG28908.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_007_122G1_scaffold_297_2
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1086..1526
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=A5N4W0_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDK32341.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L1_007_122G1_scaffold_297_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1570..2184
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0B6Y2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ50914.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L1_007_122G1_scaffold_297_4
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2233..2616
DNA (384bp) protein (128aa)
PrgI family protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036A2DBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA69045.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L1_007_122G1_scaffold_297_5
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2576..4936
DNA (2361bp) protein (787aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U9K0_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU27286.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_007_122G1_scaffold_297_6
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4920..6668
DNA (1749bp) protein (583aa)
NlpC/P60 family protein n=1 Tax=Clostridium clostridioforme CAG:511 RepID=R7PN93_9CLOT
NlpC/P60 family protein {ECO:0000313|EMBL:CDF26355.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_007_122G1_scaffold_297_7
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6683..6940
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Enterococcus faecium RepID=R2ME44_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOH32630.1}; TaxID=1157480 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0185.;"
hypothetical protein
L1_007_122G1_scaffold_297_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6927..8015
DNA (1089bp) protein (363aa)
SH3 domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DPQ2_CLOS4
SH3 domain protein {ECO:0000313|EMBL:ERI98458.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
bacteriocin
L1_007_122G1_scaffold_297_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8012..8212
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R2T7_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL02927.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_122G1_scaffold_297_10
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8216..8605
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IJU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22066.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_007_122G1_scaffold_297_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8707..9069
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=N9ZNP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDM97615.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_122G1_scaffold_297_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9119..9298
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Enterococcus faecium RepID=R2L6N4_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EHF06431.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_007_122G1_scaffold_297_13
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9295..9642
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ADX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41435.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_007_122G1_scaffold_297_14
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9670..10527)
DNA (858bp) protein (286aa)
Adenine-specific DNA methyltransferase Dam n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LDU7_THEPS
dam2; adenine-specific DNA methyltransferase Dam
Adenine-specific DNA methyltransferase Dam {ECO:0000313|EMBL:AFV11023.1}; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
L1_007_122G1_scaffold_297_15
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10533..11927)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F2Z7_SPICH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ19905.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
L1_007_122G1_scaffold_297_16
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12146..12439
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AFB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41433.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_007_122G1_scaffold_297_17
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12525..13922
DNA (1398bp) protein (466aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AKU4_9CLOT
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:CCX41432.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Relaxase/mobilization nuclease family protein
L1_007_122G1_scaffold_297_18
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14120..14479)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41431.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_007_122G1_scaffold_297_19
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14647..15021
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HUY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16702.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
GntR family transcriptional regulator
L1_007_122G1_scaffold_297_20
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15024..15890
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HUY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16703.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_297_21
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15880..16542
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HUY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16704.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
ABC transporter permease
L1_007_122G1_scaffold_297_22
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16577..16960
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IVN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26000.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L1_007_122G1_scaffold_297_23
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17381..17485
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AQG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41426.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_007_122G1_scaffold_297_24
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17676..18098
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ADV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41425.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
sigma-70 region 4 type 2
L1_007_122G1_scaffold_297_25
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18220..19443)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZSB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ19922.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
transposase IS116/IS110/IS902 family protein
L1_007_122G1_scaffold_297_26
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20157..20321
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AHX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX41424.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_007_122G1_scaffold_297_27
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20414..22105
DNA (1692bp) protein (564aa)
TnpX site-specific recombinase family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DTQ5_CLOS4
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:ERJ00261.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_122G1_scaffold_297_28
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22400..24427)
DNA (2028bp) protein (676aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4C8_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK81669.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L1_007_122G1_scaffold_297_29

Not on your lists

comp(24619..25782)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IGA1_PHYMF
Uncharacterized protein {ECO:0000313|EMBL:KKL76422.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_297_30
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25828..26781)
DNA (954bp) protein (318aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4D7_SPISS
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADK81678.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Displaying items 1-30 of 86 in total

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