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L1_007_122G1_scaffold_319

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_319_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(108..1466)
DNA (1359bp) protein (453aa)
Diguanylate cyclase (GGDEF) domain protein n=19 Tax=Escherichia coli RepID=D7YAA3_ECOLX
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EOV64331.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
ycdT; diguanylate cyclase
L1_007_122G1_scaffold_319_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2053..2292
DNA (240bp) protein (80aa)
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=1 Tax=Escherichia coli BCE011_MS-01 RepID=N2RPW5_ECOLX
pgaA; outer membrane protein PgaA
Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:EZD89115.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L1_007_122G1_scaffold_319_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2614..4476
DNA (1863bp) protein (621aa)
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA n=4 Tax=Escherichia coli RepID=D7YAA8_ECOLX
Poly-beta-1,6-N-acetyl-D-glucosamine export protein {ECO:0000313|EMBL:ELD72229.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
pgaA; partially N-deacetylated poly-beta-1,6-N-acetyl-D-glucosamine outer membrane porin
L1_007_122G1_scaffold_319_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4485..6503
DNA (2019bp) protein (673aa)
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB n=13 Tax=Escherichia coli RepID=D7YAA9_ECOLX
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase {ECO:0000313|EMBL:EOV64328.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
pgaB; outer membrane N-deacetylase
L1_007_122G1_scaffold_319_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6496..7821
DNA (1326bp) protein (442aa)
Poly-beta-1,6-N-acetyl-D-glucosamine synthase n=356 Tax=Enterobacteriaceae RepID=PGAC_ECOLI
N-glycosyltransferase
Predicted glycosyl transferase {ECO:0000313|EMBL:BAI29911.1}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
L1_007_122G1_scaffold_319_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7823..8236
DNA (414bp) protein (138aa)
Biofilm PGA synthesis protein PgaD n=733 Tax=Enterobacteriaceae RepID=PGAD_ECO57
putative PGA biosynthesis protein
PgaD protein {ECO:0000313|EMBL:CAU96993.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L1_007_122G1_scaffold_319_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8286..9074)
DNA (789bp) protein (263aa)
PhoH protein n=89 Tax=Escherichia coli RepID=E9YSV0_ECOLX
phoH; hypothetical protein
PhoH family protein {ECO:0000313|EMBL:EFJ95423.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
L1_007_122G1_scaffold_319_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9053..9349)
DNA (297bp) protein (99aa)
Protein phoH n=3 Tax=Escherichia coli RepID=L3IC26_ECOLX
phoH_1; Phosphate starvation-inducible protein psiH
Phosphate starvation-inducible protein psiH {ECO:0000313|EMBL:CDX06307.1}; TaxID=623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri.;"
L1_007_122G1_scaffold_319_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9682..10953)
DNA (1272bp) protein (424aa)
Tat-translocated enzyme n=4 Tax=Escherichia coli RepID=D7YAB5_ECOLX
Peroxidase ycdB {ECO:0000313|EMBL:EOW09575.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ycdB; hypothetical protein
L1_007_122G1_scaffold_319_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10959..12086)
DNA (1128bp) protein (376aa)
Iron uptake system component EfeO n=189 Tax=Enterobacteriaceae RepID=EFEO_ECOLI
hypothetical protein
Imelysin {ECO:0000313|EMBL:EGB68438.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
L1_007_122G1_scaffold_319_11
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12144..12974)
DNA (831bp) protein (277aa)
Ferrous iron permease EfeU n=770 Tax=Enterobacteriaceae RepID=EFEU_ECO57
FTR1 family protein
Ferrous iron transport permease EfeU {ECO:0000313|EMBL:EFW51646.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L1_007_122G1_scaffold_319_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13516..15024)
DNA (1509bp) protein (503aa)
Sodium/proline symporter n=24 Tax=Escherichia coli RepID=A7ZYX1_ECOHS
sodium/proline symporter
Sodium/proline symporter {ECO:0000313|EMBL:EOV80797.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L1_007_122G1_scaffold_319_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15447..19409
DNA (3963bp) protein (1321aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase n=4 Tax=Escherichia coli RepID=D7YAC2_ECOLX
PutA protein {ECO:0000313|EMBL:EOW09571.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
L1_007_122G1_scaffold_319_14
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19449..20087)
DNA (639bp) protein (213aa)
Pyrimidine utilization regulatory protein R n=1 Tax=Escherichia coli M718 RepID=F4TCP5_ECOLX
rutR; Transcriptional regulator RutR
HTH-type transcriptional regulator RutR {ECO:0000313|EMBL:EOW65970.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
L1_007_122G1_scaffold_319_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20375..21466
DNA (1092bp) protein (364aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
Pyrimidine monooxygenase RutA n=1 Tax=Escherichia coli H591 RepID=F4VD43_ECOLX
rutA; monooxygenase of the alternative pyrimidine degradation pathway
L1_007_122G1_scaffold_319_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21463..22158
DNA (696bp) protein (232aa)
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023142}; EC=3.5.1.110 {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023120};; Ureidoacrylate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_00830}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB n=105 Tax=Escherichia coli RepID=RUTB_ECOBD
isochorismatase hydrolase
L1_007_122G1_scaffold_319_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22170..22556
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Putative aminoacrylate peracid reductase RutC n=755 Tax=Enterobacteriaceae RepID=RUTC_ECO10
rutC; pyrimidine utilization protein C
L1_007_122G1_scaffold_319_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22564..23364
DNA (801bp) protein (267aa)
Putative aminoacrylate hydrolase RutD {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023219}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023215};; Aminohydrolase {ECO:0000256|HAMAP-Rule:MF_00832}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
Putative aminoacrylate hydrolase RutD n=4 Tax=Escherichia coli RepID=D7YAC7_ECOLX
pyrimidine utilization protein D
L1_007_122G1_scaffold_319_19
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23374..23964
DNA (591bp) protein (197aa)
Probable malonic semialdehyde reductase RutE {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.1.1.298 {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
Probable malonic semialdehyde reductase RutE n=32 Tax=Enterobacteriaceae RepID=RUTE_SHIF8
hypothetical protein
L1_007_122G1_scaffold_319_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23975..24469
DNA (495bp) protein (165aa)
FMN reductase (NADH) RutF {ECO:0000256|HAMAP-Rule:MF_00833}; EC=1.5.1.42 {ECO:0000256|HAMAP-Rule:MF_00833};; FMN reductase {ECO:0000256|HAMAP-Rule:MF_00833}; NADH-flavin reductase RutF {ECO:0000256|HAMAP-Rule:MF_00833}; NADH:flavin oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00833}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
FMN reductase (NADH) RutF n=2 Tax=Enterobacteriaceae RepID=F4NDK4_9ENTR
ycdH; putative oxidoreductase, flavin:NADH component
L1_007_122G1_scaffold_319_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24490..25818
DNA (1329bp) protein (443aa)
Pyrimidine utilization transport protein G n=18 Tax=Escherichia coli RepID=D7YAD0_ECOLX
Pyrimidine utilization transport protein G {ECO:0000313|EMBL:EFJ95413.1}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
ycdG; transport protein
L1_007_122G1_scaffold_319_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26076..26249)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3490-1 RepID=T9LX63_ECOLX
ymdF; hypothetical protein
Stress-induced protein, KGG, repeat protein {ECO:0000313|EMBL:EIL36457.1}; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 str. CVM9942.;"
L1_007_122G1_scaffold_319_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26622..27218
DNA (597bp) protein (199aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
NAD(P)H dehydrogenase (quinone) n=1031 Tax=Enterobacteriaceae RepID=NQOR_ECO24
wrbA; NAD(P)H:quinone oxidoreductase
L1_007_122G1_scaffold_319_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27239..27466
DNA (228bp) protein (76aa)
Uncharacterized protein YccJ n=1422 Tax=Enterobacteriaceae RepID=YCCJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK20823.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L1_007_122G1_scaffold_319_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27504..28745)
DNA (1242bp) protein (414aa)
glucose-1-phosphatase/inositol phosphatase (EC:3.1.3.10)
Histidine acid phosphatase n=6 Tax=Enterobacteriaceae RepID=D7YAD4_ECOLX
Histidine acid phosphatase {ECO:0000313|EMBL:EKJ82830.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L1_007_122G1_scaffold_319_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29028..29276)
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L3ICU7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELD72205.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
yccE; yccE
L1_007_122G1_scaffold_319_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29400..30284)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE100 RepID=S1H2J5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW09557.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
L1_007_122G1_scaffold_319_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30544..31464
DNA (921bp) protein (307aa)
Curved DNA-binding protein n=105 Tax=Enterobacteriaceae RepID=CBPA_ECO24
cbpA; curved DNA-binding protein CbpA
Curved DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_01154, ECO:0000256|SAAS:SAAS00010094}; TaxID=1268979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907357.;"
L1_007_122G1_scaffold_319_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31464..31769
DNA (306bp) protein (102aa)
Chaperone modulatory protein CbpM n=14 Tax=Escherichia coli RepID=B3I7K0_ECOLX
cbpM; chaperone-modulator protein CbpM
Chaperone modulatory protein CbpM {ECO:0000256|HAMAP-Rule:MF_01155}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L1_007_122G1_scaffold_319_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31862..32461)
DNA (600bp) protein (200aa)
Chaperone protein TorD n=4 Tax=Escherichia coli RepID=D7YAE0_ECOLX
Chaperone protein TorD {ECO:0000256|HAMAP-Rule:MF_01150, ECO:0000256|SAAS:SAAS00014573}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
torD; Chaperone protein TorD
Displaying items 1-30 of 38 in total

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