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L1_007_122G1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_342_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72292.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_342_2
unknown

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comp(174..485)
DNA (312bp) protein (104aa)

This feature has no annotations

L1_007_122G1_scaffold_342_3
unknown

Not on your lists

comp(659..853)
DNA (195bp) protein (65aa)

This feature has no annotations

L1_007_122G1_scaffold_342_4
unknown

Not on your lists

comp(869..1078)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_007_122G1_scaffold_342_5
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1123..1326)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BKK8_9CLOT
Tax=BJP_IG2069_Clostridiales_48_15
L1_007_122G1_scaffold_342_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

1525..1974
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14503.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative Xre family DNA-binding protein
L1_007_122G1_scaffold_342_7
Thermus phage phi OH2, Caudovirales, Viruses

Not on your lists

1976..2419
DNA (444bp) protein (148aa)
Predicted Zn peptidase n=3 Tax=root RepID=S6B1N5_9CAUD
hypothetical protein
Predicted Zn peptidase {ECO:0000313|EMBL:BAN62931.1}; TaxID=1352230 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales.;" source="Thermus phage phi OH2.;"
L1_007_122G1_scaffold_342_8
Streptococcus tigurinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2457..3185
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Streptococcus tigurinus AZ_3a RepID=M3JI67_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EMG32457.1}; TaxID=1282664 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus tigurinus AZ_3a.;"
hypothetical protein
L1_007_122G1_scaffold_342_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3325..4509
DNA (1185bp) protein (395aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI84_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ07070.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Site-specific recombinase XerD
L1_007_122G1_scaffold_342_10
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4625..5089)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70568.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_342_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5118..5555)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70567.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Response regulator of the LytR/AlgR family
L1_007_122G1_scaffold_342_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5751..6509
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70566.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Methyltransferase domain.
L1_007_122G1_scaffold_342_13

Not on your lists

comp(6587..7090)
DNA (504bp) protein (168aa)
Integrase core domain protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AEK1_9CLOT
Uncultured bacterium extrachromosomal DNA RGI01893 {ECO:0000313|EMBL:CDL66717.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transposase
L1_007_122G1_scaffold_342_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7178..8407)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39923.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
two-component system, response regulator YesN
L1_007_122G1_scaffold_342_15
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8620..10407
DNA (1788bp) protein (596aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT61_9FIRM
glycoside hydrolase family protein
L1_007_122G1_scaffold_342_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10510..11352
DNA (843bp) protein (281aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70563.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_342_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11603..11959)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70562.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_342_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11999..12217)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70561.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_342_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12311..12742)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70560.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_342_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12885..14444)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39927.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_342_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14449..14655)
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70558.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator
L1_007_122G1_scaffold_342_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14672..15124)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL70557.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_342_23
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15703..16746)
DNA (1044bp) protein (348aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39929.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Predicted RNA-binding protein
L1_007_122G1_scaffold_342_24
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16777..17799)
DNA (1023bp) protein (341aa)
YidC/Oxa1 family membrane protein insertase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT34_9FIRM
YidC/Oxa1 family membrane protein insertase {ECO:0000313|EMBL:EHL70612.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L1_007_122G1_scaffold_342_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17915..18208)
DNA (294bp) protein (98aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT33_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_342_26
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18213..18548)
DNA (336bp) protein (112aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT32_9FIRM
L1_007_122G1_scaffold_342_27
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18724..18858)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT31_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
LSU ribosomal protein L34P
L1_007_122G1_scaffold_342_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19209..20504
DNA (1296bp) protein (432aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT30_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
chromosomal replication initiator protein DnaA
L1_007_122G1_scaffold_342_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20781..21881
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT29_9FIRM
L1_007_122G1_scaffold_342_30
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21874..22089
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RT28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39935.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
Displaying items 1-30 of 52 in total

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