ggKbase home page

L1_007_122G1_scaffold_348

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_348_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142..1227)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T0A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58968.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_348_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1217..2656)
DNA (1440bp) protein (480aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
Protein-N(Pi)-phosphohistidine--sugar phosphotransferase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TPZ0_9CLOT
Protein-N(Pi)-phosphohistidine--sugar phosphotransferase {ECO:0000313|EMBL:CCZ58967.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_348_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2714..3604)
DNA (891bp) protein (297aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
N-acetylmuramic acid 6-phosphate etherase n=2 Tax=Clostridium RepID=R5TJ12_9CLOT
RpiR family transcriptional regulator
L1_007_122G1_scaffold_348_4
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3606..4463)
DNA (858bp) protein (286aa)
Transcriptional regulator RpiR family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T721_9CLOT
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ58964.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
RpiR family transcriptional regulator
L1_007_122G1_scaffold_348_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5175..7022)
DNA (1848bp) protein (616aa)
Putative diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TJ08_9CLOT
Putative diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CCZ58961.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
putative signaling protein
L1_007_122G1_scaffold_348_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7048..7968)
DNA (921bp) protein (307aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ58960.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_348_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8011..8442)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3ABC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00928.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_348_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8636..9028
DNA (393bp) protein (131aa)
Desulfoferrodoxin/neelaredoxin n=2 Tax=Clostridium RepID=R5TJ01_9CLOT
Putative superoxide reductase {ECO:0000313|EMBL:EFD00926.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
desulfoferrodoxin ferrous iron-binding region
L1_007_122G1_scaffold_348_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9167..10603)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00925.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_348_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10671..11513)
DNA (843bp) protein (281aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABB7_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFD00924.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transport system inner membrane protein
L1_007_122G1_scaffold_348_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11528..12433)
DNA (906bp) protein (302aa)
ABC transporter, permease protein n=2 Tax=Clostridium RepID=D3ABB6_9CLOT
Transmembrane permease MsmF {ECO:0000313|EMBL:CCZ60652.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
binding-protein-dependent transport system inner membrane protein
L1_007_122G1_scaffold_348_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12677..14011)
DNA (1335bp) protein (445aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABB4_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFD00921.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
extracellular solute-binding protein
L1_007_122G1_scaffold_348_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14180..15061)
DNA (882bp) protein (294aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=D3ABB3_9CLOT
Putative transcriptional regulator YfiF {ECO:0000313|EMBL:CCZ60654.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_348_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15058..15939)
DNA (882bp) protein (294aa)
Glycosyl hydrolase, family 43 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABB2_9CLOT
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFD00918.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
glycoside hydrolase family protein
L1_007_122G1_scaffold_348_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16323..17210
DNA (888bp) protein (296aa)
AP endonuclease family 2 n=2 Tax=Clostridium RepID=R5TNR5_9CLOT
AP endonuclease family 2 {ECO:0000313|EMBL:CCZ60656.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
sugar phosphate isomerase/epimerase
L1_007_122G1_scaffold_348_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17226..18560
DNA (1335bp) protein (445aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABA8_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFD00915.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
sugar ABC transporter periplasmic protein
L1_007_122G1_scaffold_348_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18572..19372
DNA (801bp) protein (267aa)
Putative HAD hydrolase, TIGR01457 family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABA7_9CLOT
Putative HAD hydrolase, TIGR01457 family {ECO:0000313|EMBL:EFD00914.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
HAD-superfamily hydrolase
L1_007_122G1_scaffold_348_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19758..21824)
DNA (2067bp) protein (689aa)
Alpha amylase, catalytic domain protein n=2 Tax=Clostridium RepID=D3ABA6_9CLOT
Neopullulanase 2 {ECO:0000313|EMBL:CCZ60659.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
alpha amylase
L1_007_122G1_scaffold_348_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22260..24080)
DNA (1821bp) protein (607aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Clostridium RepID=D3ABA4_9CLOT
L1_007_122G1_scaffold_348_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24093..24623)
DNA (531bp) protein (177aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EFD00910.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EFD00910.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Clostridium RepID=D3ABA3_9CLOT
L1_007_122G1_scaffold_348_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24613..26001)
DNA (1389bp) protein (463aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ABA2_9CLOT
tRNA(Ile)-lysidine synthetase
L1_007_122G1_scaffold_348_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26234..27586)
DNA (1353bp) protein (451aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
Putative stage II sporulation protein E n=2 Tax=Clostridium RepID=D3ABA1_9CLOT
Putative stage II sporulation protein E {ECO:0000313|EMBL:EFD00908.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_348_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27718..27987)
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D3ABA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00907.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
septum formation initiator
L1_007_122G1_scaffold_348_24
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28062..28424)
DNA (363bp) protein (121aa)
Spore cortex protein YabQ (Spore_YabQ) n=2 Tax=Clostridium RepID=D3AB99_9CLOT
Spore cortex protein YabQ {ECO:0000313|EMBL:CCZ60665.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Spore cortex biosynthesis protein, YabQ-like protein
L1_007_122G1_scaffold_348_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28443..28727)
DNA (285bp) protein (95aa)
Sporulation protein YabP n=3 Tax=Clostridium RepID=D3AB98_9CLOT
Sporulation protein YabP {ECO:0000313|EMBL:ENY90791.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
sporulation protein YabP
L1_007_122G1_scaffold_348_26
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28788..29027)
DNA (240bp) protein (80aa)
S4 domain protein n=3 Tax=Clostridium RepID=D3AB97_9CLOT
S4 RNA-binding domain protein {ECO:0000313|EMBL:CCZ60667.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
RNA-binding S4 domain-containing protein
L1_007_122G1_scaffold_348_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29031..29306)
DNA (276bp) protein (92aa)
DNA-binding protein HU 1 n=3 Tax=Clostridium RepID=D3AB96_9CLOT
DNA-binding protein HU {ECO:0000313|EMBL:CCZ60668.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
histone family protein DNA-binding protein
L1_007_122G1_scaffold_348_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29413..29937)
DNA (525bp) protein (175aa)
MazG nucleotide pyrophosphohydrolase domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AB95_9CLOT
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EFD00902.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
MazG nucleotide pyrophosphohydrolase
L1_007_122G1_scaffold_348_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29891..31183)
DNA (1293bp) protein (431aa)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AB94_9CLOT
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EFD00901.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
O-acetylhomoserine/O-acetylserine sulfhydrylase
L1_007_122G1_scaffold_348_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31383..33506
DNA (2124bp) protein (708aa)
Hydrolase CocE/NonD family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AB92_9CLOT
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EFD00900.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
esterase
Displaying items 1-30 of 58 in total

View Taxonomy