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L1_007_122G1_scaffold_350

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_350_1
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1358)
DNA (1356bp) protein (452aa)
Glycosyltransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3P3_9CLOT
Glycosyltransferase {ECO:0000313|EMBL:CCX37715.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Glycosyltransferase
L1_007_122G1_scaffold_350_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(1348..2445)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 PF9_9FIRM">RepID=R6YPF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30466.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_007_122G1_scaffold_350_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2788..4923)
DNA (2136bp) protein (712aa)
Glycoside hydrolase family 35 n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1N7_9CLOT
Glycoside hydrolase family 35 {ECO:0000313|EMBL:CCY67241.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
glycoside hydrolase family 35
L1_007_122G1_scaffold_350_4
unknown

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comp(4974..5147)
DNA (174bp) protein (58aa)

This feature has no annotations

L1_007_122G1_scaffold_350_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5229..6074
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQ77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67239.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_122G1_scaffold_350_6
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6189..6779)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LGF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS57456.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
nitroreductase
L1_007_122G1_scaffold_350_7
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6828..7457)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U5G8_ETHHY
hypothetical protein
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_122G1_scaffold_350_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7769..9739)
DNA (1971bp) protein (657aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVL3_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO61013.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_007_122G1_scaffold_350_9
unknown

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comp(9847..12426)
DNA (2580bp) protein (860aa)

This feature has no annotations

L1_007_122G1_scaffold_350_10
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12858..18302)
DNA (5445bp) protein (1815aa)
Ig domain protein group 2 domain protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EGW5_9FIRM
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CDA89287.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Ig domain-containing protein
L1_007_122G1_scaffold_350_11
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18907..20112)
DNA (1206bp) protein (402aa)
Cell division protein FtsZ n=1 Tax=Clostridium sp. CAG:413 RepID=R6NPI2_9CLOT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
cell division protein FtsZ
L1_007_122G1_scaffold_350_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20319..21305)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000371C7B5
POTRA domain protein, FtsQ-type {ECO:0000313|EMBL:EJF40470.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ftsQ; Cell division protein ftsQ homolog
L1_007_122G1_scaffold_350_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21283..22563)
DNA (1281bp) protein (427aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MH33_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L1_007_122G1_scaffold_350_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22687..23817)
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IU81_9FIRM
L1_007_122G1_scaffold_350_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23876..25150)
DNA (1275bp) protein (425aa)
Cell cycle protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MGI2_9FIRM
Cell cycle protein {ECO:0000313|EMBL:CCY90820.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
cell cycle protein
L1_007_122G1_scaffold_350_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25188..26225)
DNA (1038bp) protein (346aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MZP4_9FIRM
L1_007_122G1_scaffold_350_17
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26222..27583)
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XV69_9FIRM
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
L1_007_122G1_scaffold_350_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27602..29047)
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0R0_9FIRM
UDP-N-acetylmuramyl tripeptide synthetase
L1_007_122G1_scaffold_350_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29300..31594)
DNA (2295bp) protein (765aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Putative stage V sporulation protein D n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MH45_9FIRM
Putative stage V sporulation protein D {ECO:0000313|EMBL:CCY90828.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L1_007_122G1_scaffold_350_20
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(31788..32411)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BEB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD64165.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
putative membrane protein
L1_007_122G1_scaffold_350_21
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32468..33400)
DNA (933bp) protein (311aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4S7_9CLOT
L1_007_122G1_scaffold_350_22
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33452..33991)
DNA (540bp) protein (180aa)
cell division protein MraZ n=1 Tax=Bacillus fordii RepID=UPI00037CBA36
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
mraZ family protein
L1_007_122G1_scaffold_350_23
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34284..34682)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GD00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG79085.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
hypothetical protein
L1_007_122G1_scaffold_350_24
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34836..35747)
DNA (912bp) protein (304aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F4R1_CLOS4
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERJ00212.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
metallo-beta-lactamase family protein
L1_007_122G1_scaffold_350_25
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35695..36321)
DNA (627bp) protein (209aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B415_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI66975.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
beta-lactamase domain-containing protein
L1_007_122G1_scaffold_350_26
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36717..37361
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37186.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_007_122G1_scaffold_350_27
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37356..37829)
DNA (474bp) protein (158aa)
N-acetyltransferase GCN5 n=1 Tax=Butyrivibrio sp. AD3002 RepID=UPI0003B55B65
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG95903.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Predicted acetyltransferase
L1_007_122G1_scaffold_350_28
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38144..39199
DNA (1056bp) protein (352aa)
Methicillin resistance protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J4B6_9FIRM
Methicillin resistance protein
Methicillin resistance protein {ECO:0000313|EMBL:CDZ23995.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Displaying 28 items

View Taxonomy