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L1_007_122G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_355_1
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..655
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IM85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22901.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L1_007_122G1_scaffold_355_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

992..2077
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=root RepID=R5MXY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90206.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
transcriptional regulator, CdaR family
L1_007_122G1_scaffold_355_3
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2195..3100
DNA (906bp) protein (302aa)
Cell division ATP-binding protein FtsE n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6ENX6_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDA91682.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
cell division ATP-binding protein FtsE
L1_007_122G1_scaffold_355_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3097..4008
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MEQ7_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Cell division protein
L1_007_122G1_scaffold_355_5
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4001..5329
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y301_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA19204.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Membrane-bound metallopeptidase
L1_007_122G1_scaffold_355_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5347..6549
DNA (1203bp) protein (401aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Peptidase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVX8_9FIRM
Peptidase {ECO:0000313|EMBL:CDB42142.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L1_007_122G1_scaffold_355_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6952..7683
DNA (732bp) protein (244aa)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NL46_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDC11945.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Glycosyl transferase, group 2 family protein
L1_007_122G1_scaffold_355_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7766..8587
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IT25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41147.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
family 2 glycosyl transferase
L1_007_122G1_scaffold_355_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8584..9447
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6W4_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ABC-2 type transporter
L1_007_122G1_scaffold_355_10
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9460..10203
DNA (744bp) protein (248aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E0X6_9FIRM
ABC transporter {ECO:0000313|EMBL:CDA90246.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L1_007_122G1_scaffold_355_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10288..11004
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C905_9CLOT
hypothetical protein
L1_007_122G1_scaffold_355_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10997..12022
DNA (1026bp) protein (342aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTF4_9FIRM
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:CDB41143.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
alcohol dehydrogenase
L1_007_122G1_scaffold_355_13
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12148..13500
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NIE8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11933.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
glycosyl transferase
L1_007_122G1_scaffold_355_14
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13554..14708
DNA (1155bp) protein (385aa)
Peptidyl-tRNA hydrolase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DRJ3_9FIRM
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:CDA90245.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L1_007_122G1_scaffold_355_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14808..16127
DNA (1320bp) protein (440aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EDO62777.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EDO62777.1};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VP90_9CLOT
L1_007_122G1_scaffold_355_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16208..18661
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ86_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81581.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L1_007_122G1_scaffold_355_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18785..19456
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MSQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92754.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L1_007_122G1_scaffold_355_18
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19535..19846
DNA (312bp) protein (104aa)
Putative septation protein SpoVG n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2LYR6_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
septation protein spoVG
L1_007_122G1_scaffold_355_19
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19877..21061
DNA (1185bp) protein (395aa)
papS; poly A polymerase (EC:2.7.7.19)
Poly A polymerase {ECO:0000313|EMBL:CDZ24105.1}; EC=2.7.7.19 {ECO:0000313|EMBL:CDZ24105.1};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Poly A polymerase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B930_9CLOT
L1_007_122G1_scaffold_355_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21068..21436
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ADC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95273.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L1_007_122G1_scaffold_355_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21591..22349
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCN9_9CLOT
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJJ71189.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_355_22
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22514..22975
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NFX0_9FIRM
GNAT family acetyltransferase {ECO:0000313|EMBL:KEZ87261.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
acetyltransferase
L1_007_122G1_scaffold_355_23
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23167..24048
DNA (882bp) protein (294aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYU5_9FIRM
shikimate/quinate 5-dehydrogenase
Shikimate/quinate 5-dehydrogenase {ECO:0000313|EMBL:CDZ24106.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_007_122G1_scaffold_355_24
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24158..24730
DNA (573bp) protein (191aa)
Dipicolinate synthase subunit B n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E937_9CLOT
Dipicolinic acid synthetase, B subunit {ECO:0000313|EMBL:EEG32023.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_007_122G1_scaffold_355_25
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(24896..25738)
DNA (843bp) protein (281aa)
Transcriptional regulator id=4041413 bin=GWF2_Firmicute_57_13 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
transcriptional regulator
Tax=GWF2_Tenericutes_57_13_curated
L1_007_122G1_scaffold_355_26
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25997..27331
DNA (1335bp) protein (445aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CD40_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERI65271.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
major facilitator superfamily protein
L1_007_122G1_scaffold_355_27

Not on your lists

27312..28064
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C8I1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD89115.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative esterase
L1_007_122G1_scaffold_355_28
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

28069..29325
DNA (1257bp) protein (419aa)
PHP domain protein id=4041416 bin=GWF2_Firmicute_57_13 species=Clostridium saccharolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
PHP domain-containing protein
Tax=GWF2_Tenericutes_57_13_curated
L1_007_122G1_scaffold_355_29
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29479..29697
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=N1ZZK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ22462.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L1_007_122G1_scaffold_355_30
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29960..30922
DNA (963bp) protein (321aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8)
Mannose-6-phosphate isomerase class I n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KZ86_9FIRM
Mannose-6-phosphate isomerase class I {ECO:0000313|EMBL:CDE81126.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Displaying items 1-30 of 35 in total

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