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L1_007_122G1_scaffold_356

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_356_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..2175)
-----------------
DNA (2175bp)
protein (725aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZE78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38161.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L1_007_122G1_scaffold_356_2
unknown

Not on your lists

comp(2176..2967)
-----------------
DNA (792bp)
protein (264aa)

This feature has no annotations

L1_007_122G1_scaffold_356_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3050..7135)
-----------------
DNA (4086bp)
protein (1362aa)
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF40248.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
cwlP; SPbeta phage protein; lytic transglycosylase
L1_007_122G1_scaffold_356_4
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7286..7750
-----------------
DNA (465bp)
protein (155aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YNB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59047.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L1_007_122G1_scaffold_356_5
unknown

Not on your lists

8792..9022
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

L1_007_122G1_scaffold_356_6
unknown

Not on your lists

comp(9326..9760)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

L1_007_122G1_scaffold_356_7
unknown

Not on your lists

comp(9804..10463)
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

L1_007_122G1_scaffold_356_8
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10684..11415)
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KD93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44414.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_007_122G1_scaffold_356_9
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11488..12201)
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KD74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44425.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_007_122G1_scaffold_356_10
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12246..12704)
-----------------
DNA (459bp)
protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:ETT49348.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
L1_007_122G1_scaffold_356_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12867..13613)
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 PF9_9CLOT">RepID=R5KPF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68638.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_122G1_scaffold_356_12
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13632..16367)
-----------------
DNA (2736bp)
protein (912aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KDW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS44416.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
RNA dependent RNA polymerase.
L1_007_122G1_scaffold_356_13
unknown

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comp(16402..16842)
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

L1_007_122G1_scaffold_356_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17021..17608)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PC74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10829.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_122G1_scaffold_356_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18002..18712
-----------------
DNA (711bp)
protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=2 Tax=root RepID=R5N203_9FIRM
L1_007_122G1_scaffold_356_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18718..19278
-----------------
DNA (561bp)
protein (187aa)
Ribosome-recycling factor n=2 Tax=Clostridium RepID=A7VWJ5_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ribosome recycling factor
L1_007_122G1_scaffold_356_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19446..20171
-----------------
DNA (726bp)
protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
uppS; Isoprenyl transferase (EC:2.5.1.-)
Isoprenyl transferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWH9_9FIRM
L1_007_122G1_scaffold_356_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20273..21118
-----------------
DNA (846bp)
protein (282aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Phosphatidate cytidylyltransferase n=2 Tax=root RepID=R5N0Z9_9FIRM
phosphatidate cytidylyltransferase
L1_007_122G1_scaffold_356_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21260..22417
-----------------
DNA (1158bp)
protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N207_9FIRM
L1_007_122G1_scaffold_356_20
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22462..23523
-----------------
DNA (1062bp)
protein (354aa)
RIP metalloprotease RseP n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MIF2_9FIRM
RIP metalloprotease RseP {ECO:0000313|EMBL:CCY91248.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
membrane-associated zinc metalloprotease
L1_007_122G1_scaffold_356_21
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23564..24613
-----------------
DNA (1050bp)
protein (350aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6X6_9FIRM
L1_007_122G1_scaffold_356_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24654..28958
-----------------
DNA (4305bp)
protein (1435aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
polC; DNA polymerase III PolC-type (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWK1_9CLOT
L1_007_122G1_scaffold_356_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28978..30447
-----------------
DNA (1470bp)
protein (490aa)
nanB; sialidase B precursor (neuraminidase B) (EC:3.2.1.18)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XHL0_9FIRM
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDK25258.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L1_007_122G1_scaffold_356_24
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30573..31115
-----------------
DNA (543bp)
protein (181aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TFW7_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGD46586.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
L1_007_122G1_scaffold_356_25
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31492..32160
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=1 Tax=Turicibacter sp. HGF1 RepID=F0HCL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF64282.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
transcriptional regulator
L1_007_122G1_scaffold_356_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32218..33450
-----------------
DNA (1233bp)
protein (411aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWK3_9CLOT
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
ATP phosphoribosyltransferase, regulatory subunit
L1_007_122G1_scaffold_356_27
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33447..34079
-----------------
DNA (633bp)
protein (211aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MMN2_9FIRM
L1_007_122G1_scaffold_356_28
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34076..35359
-----------------
DNA (1284bp)
protein (428aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=2 Tax=root RepID=R5N169_9FIRM
L1_007_122G1_scaffold_356_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35399..36472
-----------------
DNA (1074bp)
protein (358aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MGW3_9FIRM
L1_007_122G1_scaffold_356_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36481..37059
-----------------
DNA (579bp)
protein (193aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hisB; Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MMM6_9FIRM
Displaying items 1-30 of 32 in total

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