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L1_007_122G1_scaffold_362

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_362_1
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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175..555
DNA (381bp) protein (127aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
mRNA interferase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8X0_9FIRM
growth inhibitor
L1_007_122G1_scaffold_362_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

657..812
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12365.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_007_122G1_scaffold_362_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

935..2524
DNA (1590bp) protein (530aa)
Resolvase, N-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W8_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDS12364.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
resolvase
L1_007_122G1_scaffold_362_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2525..3367
DNA (843bp) protein (281aa)
Recombinase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W7_9FIRM
Recombinase {ECO:0000313|EMBL:EDS12363.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
recombinase
L1_007_122G1_scaffold_362_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3364..5013
DNA (1650bp) protein (550aa)
Resolvase, N-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W6_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDS12362.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
resolvase
L1_007_122G1_scaffold_362_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5010..5756
DNA (747bp) protein (249aa)
Ser/Thr phosphatase family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W5_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDS12361.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_122G1_scaffold_362_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5893..7746
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12360.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_122G1_scaffold_362_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8061..8717)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GA69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05077.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Bacterial Ig-like domain (group 2).
L1_007_122G1_scaffold_362_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9005..9835)
DNA (831bp) protein (277aa)
DNA-damage-inducible protein D n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LMH0_9FIRM
DNA-damage-inducible protein D {ECO:0000313|EMBL:EET58167.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_007_122G1_scaffold_362_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10286..10459)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03077.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_362_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10489..11130)
DNA (642bp) protein (214aa)
vatD; streptogramin A acetyltransferase VatD (EC:2.3.1.-)
Chloramphenicol acetyltransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VPJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB03078.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_362_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11331..11585
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9WS63_9CLOT
Site-specific recombinases, DNA invertase Pin homologs
Uncharacterized protein {ECO:0000313|EMBL:EHL74694.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_362_13
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11982..12629)
DNA (648bp) protein (216aa)
Regulatory protein TetR n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SX42_SYNGF
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ADY55825.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L1_007_122G1_scaffold_362_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12853..14661
DNA (1809bp) protein (603aa)
xenobiotic ABC transporter ATPase (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99527.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_007_122G1_scaffold_362_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14658..16415
DNA (1758bp) protein (586aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99528.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_122G1_scaffold_362_16
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17134..17772)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ASZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY66544.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_122G1_scaffold_362_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17756..18517)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ASZ0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO60305.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L1_007_122G1_scaffold_362_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18517..18996)
DNA (480bp) protein (160aa)
AbrB family transcriptional regulator n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1ASY9_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EDO60304.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L1_007_122G1_scaffold_362_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

19330..19587
DNA (258bp) protein (86aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F132_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB03079.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
multi antimicrobial extrusion protein MatE
L1_007_122G1_scaffold_362_20
Treponema pedis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19978..21315
DNA (1338bp) protein (446aa)
Na+-driven multidrug efflux pump n=1 Tax=Treponema pedis str. T A4 RepID=S6A182_9SPIO
Na+-driven multidrug efflux pump
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:AGT44543.1}; TaxID=1291379 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema pedis str. T A4.;"
L1_007_122G1_scaffold_362_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

21341..22522
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03080.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_362_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(22570..24261)
DNA (1692bp) protein (564aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F242_9FIRM
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:CDB03081.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NAD(FAD)-dependent dehydrogenase
L1_007_122G1_scaffold_362_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(24273..24584)
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FM01_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
thioredoxin
L1_007_122G1_scaffold_362_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(24696..25454)
DNA (759bp) protein (253aa)
Metal cation transporter ZIP family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER69_9FIRM
Metal cation transporter ZIP family {ECO:0000313|EMBL:CDB03083.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
zinc/iron permease
L1_007_122G1_scaffold_362_25
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26019..26633)
DNA (615bp) protein (205aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DCU9_CLOS4
Methyltransferase domain protein {ECO:0000313|EMBL:ERJ00660.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_007_122G1_scaffold_362_26
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26711..27670)
DNA (960bp) protein (320aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DVY0_CLOS4
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERJ00659.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
AraC family transcriptional regulator
L1_007_122G1_scaffold_362_27
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27873..29648
DNA (1776bp) protein (592aa)
ygaD2; putative multidrug export ATP-binding/permease protein YgaD (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F0L6_CLOS4
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ00658.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L1_007_122G1_scaffold_362_28
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29642..31384
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F5X3_CLOS4
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ00657.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ABC transporter related protein
L1_007_122G1_scaffold_362_29
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31475..32416
DNA (942bp) protein (314aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DUS3_CLOS4
ABC transporter, permease protein {ECO:0000313|EMBL:ERJ00656.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L1_007_122G1_scaffold_362_30
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32406..33230
DNA (825bp) protein (275aa)
Putative nickel transport system permease protein NikC n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DCU4_CLOS4
Putative nickel transport system permease protein NikC {ECO:0000313|EMBL:ERJ00655.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Displaying items 1-30 of 35 in total

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