ggKbase home page

L1_007_122G1_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_366_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

3..161
DNA (159bp) protein (53aa)
Hydantoin racemase (EC:5.1.99.5)
Hydantoin racemase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZK3_9FIRM
Hydantoin racemase {ECO:0000313|EMBL:CDB02544.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

189..1379
DNA (1191bp) protein (397aa)
N-carbamoyl-L-amino acid amidohydrolase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPQ9_9FIRM
N-carbamoyl-L-amino acid amidohydrolase {ECO:0000313|EMBL:CDB02543.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
N-carbamoyl-L-amino acid amidohydrolase
L1_007_122G1_scaffold_366_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

1406..2812
DNA (1407bp) protein (469aa)
D-hydantoinase (EC:3.5.2.-)
Dihydropyrimidinase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKF9_9FIRM
Dihydropyrimidinase {ECO:0000313|EMBL:CDB02542.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

2825..3283
DNA (459bp) protein (153aa)
Endoribonuclease family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0K1_9FIRM
Endoribonuclease family protein {ECO:0000313|EMBL:CDB02541.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
endoribonuclease family protein
L1_007_122G1_scaffold_366_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

3296..4273
DNA (978bp) protein (326aa)
threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERK9_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:CDB02540.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

4418..5953
DNA (1536bp) protein (512aa)
Na+/H+ antiporter family protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZK0_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDB02539.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Na+/H+ antiporter NhaC
L1_007_122G1_scaffold_366_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

6044..7465
DNA (1422bp) protein (474aa)
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPQ5_9FIRM
Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase) {ECO:0000313|EMBL:CDB02538.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_366_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

7524..8369
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02537.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
cation/cationic drug transporter
L1_007_122G1_scaffold_366_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

8549..12082
DNA (3534bp) protein (1178aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
pyruvate-ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0J7_9FIRM
L1_007_122G1_scaffold_366_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

12097..12873
DNA (777bp) protein (259aa)
crt; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.17)
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERK5_9FIRM
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:CDB02535.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

12890..14032
DNA (1143bp) protein (381aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZJ7_9FIRM
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDB02534.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

14056..14856
DNA (801bp) protein (267aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPQ2_9FIRM
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:CDB02533.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
etfB; electron transfer flavoprotein beta subunit
L1_007_122G1_scaffold_366_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

14874..16004
DNA (1131bp) protein (377aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKE9_9FIRM
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CDB02532.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
etfA; electron transfer flavoprotein alpha subunit
L1_007_122G1_scaffold_366_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(16867..17184)
DNA (318bp) protein (106aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0J5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB02531.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(17364..17738)
DNA (375bp) protein (125aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0J5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB02531.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
transcriptional regulator, LysR family
L1_007_122G1_scaffold_366_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

17850..18401
DNA (552bp) protein (184aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERK1_9FIRM
L1_007_122G1_scaffold_366_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

18398..19003
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZJ4_9FIRM
ruvA; Holliday junction DNA helicase RuvA
L1_007_122G1_scaffold_366_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

19015..20022
DNA (1008bp) protein (336aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPP8_9FIRM
L1_007_122G1_scaffold_366_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

20074..21123
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKE6_9FIRM
L1_007_122G1_scaffold_366_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21188..22150)
DNA (963bp) protein (321aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0J1_9FIRM
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:CDB02526.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
pyridoxal-5'-phosphate-dependent protein beta subunit
L1_007_122G1_scaffold_366_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

22309..23430
DNA (1122bp) protein (374aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERJ7_9FIRM
L1_007_122G1_scaffold_366_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

23479..24639
DNA (1161bp) protein (387aa)
putative tRNA (Uracil-5-)-methyltransferase (EC:2.1.1.35)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02524.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L1_007_122G1_scaffold_366_23
unknown

Not on your lists

24688..24876
DNA (189bp) protein (63aa)

This feature has no annotations

L1_007_122G1_scaffold_366_24
unknown

Not on your lists

24845..24982
DNA (138bp) protein (46aa)

This feature has no annotations

L1_007_122G1_scaffold_366_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25089..26231
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03426.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative transcriptional regulator with HTH domain
L1_007_122G1_scaffold_366_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26497..26997
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YT87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ15233.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transcriptional regulator
L1_007_122G1_scaffold_366_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

27489..28583
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02523.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Protein involved in cell division
L1_007_122G1_scaffold_366_28
unknown

Not on your lists

28534..28785
DNA (252bp) protein (84aa)

This feature has no annotations

L1_007_122G1_scaffold_366_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

28814..29899
DNA (1086bp) protein (362aa)
Possible alpha-methylacyl-CoA racemase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKE1_9FIRM
Possible alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:CDB02522.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_007_122G1_scaffold_366_30
Anaeroglobus geminatus, Anaeroglobus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30087..30539
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YJS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM38261.1}; TaxID=861450 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaeroglobus.;" source="Anaeroglobus geminatus F0357.;"
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy