ggKbase home page

L1_007_122G1_scaffold_367

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_367_1
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..96
DNA (96bp) protein (32aa)
Elongation factor Tu n=3 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6A7_9FIRM
Elongation factor Tu {ECO:0000313|EMBL:ETI96419.1}; Flags: Fragment;; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
elongation factor Tu
L1_007_122G1_scaffold_367_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


506..817
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=2 Tax=Clostridiales RepID=B0A6A8_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpsJ; 30S ribosomal protein S10
L1_007_122G1_scaffold_367_3
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


924..1553
DNA (630bp) protein (210aa)
50S ribosomal protein L3 n=2 Tax=Clostridiales RepID=B0A6A9_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rplC; 50S ribosomal protein L3
L1_007_122G1_scaffold_367_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1583..2206
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=2 Tax=Clostridiales RepID=B0A6B0_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplD; 50S ribosomal protein L4
L1_007_122G1_scaffold_367_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2208..2498
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=2 Tax=Clostridiales RepID=B0A6B1_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rplW; 50S ribosomal protein L23
L1_007_122G1_scaffold_367_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2528..3358
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=2 Tax=Clostridiales RepID=B0A6B2_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rplB; 50S ribosomal protein L2
L1_007_122G1_scaffold_367_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3420..3701
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=2 Tax=Clostridiales RepID=B0A6B3_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpsS; 30S ribosomal protein S19
L1_007_122G1_scaffold_367_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3733..4068
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=2 Tax=Clostridiales RepID=B0A6B4_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rplV; 50S ribosomal protein L22
L1_007_122G1_scaffold_367_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4087..4875
DNA (789bp) protein (263aa)
30S ribosomal protein S3 n=2 Tax=Clostridiales RepID=B0A6B5_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpsC; 30S ribosomal protein S3
L1_007_122G1_scaffold_367_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


4910..5341
DNA (432bp) protein (144aa)
50S ribosomal protein L16 n=2 Tax=Clostridiales RepID=R5X4G8_9CLOT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rplP; 50S ribosomal protein L16
L1_007_122G1_scaffold_367_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5343..5546
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=2 Tax=Clostridiales RepID=B0A6B7_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpmC; 50S ribosomal protein L29
L1_007_122G1_scaffold_367_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5569..5823
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1U7_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rpsQ; 30S ribosomal protein S17
L1_007_122G1_scaffold_367_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5848..6216
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Clostridiales RepID=B0A6B9_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplN; 50S ribosomal protein L14
L1_007_122G1_scaffold_367_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6241..6546
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=2 Tax=Clostridiales RepID=B0A6C0_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplX; 50S ribosomal protein L24
L1_007_122G1_scaffold_367_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6577..7119
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=2 Tax=Clostridiales RepID=B0A6C1_9FIRM
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplE; 50S ribosomal protein L5
L1_007_122G1_scaffold_367_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7138..7323
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=2 Tax=Clostridiales RepID=B0A6C2_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpsN; 30S ribosomal protein S14
L1_007_122G1_scaffold_367_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7357..7755
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A6C3_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpsH; 30S ribosomal protein S8
L1_007_122G1_scaffold_367_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7786..8328
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=2 Tax=Clostridiales RepID=B0A6C4_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplF; 50S ribosomal protein L6
L1_007_122G1_scaffold_367_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8394..8762
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=2 Tax=Clostridiales RepID=B0A6C5_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rplR; 50S ribosomal protein L18
L1_007_122G1_scaffold_367_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8784..9290
DNA (507bp) protein (169aa)
30S ribosomal protein S5 n=2 Tax=Clostridiales RepID=B0A6C6_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpsE; 30S ribosomal protein S5
L1_007_122G1_scaffold_367_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9305..9490
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=2 Tax=Clostridiales RepID=B0A6C7_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpmD; 50S ribosomal protein L30
L1_007_122G1_scaffold_367_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9526..9969
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=2 Tax=Clostridiales RepID=B0A6C8_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rplO; 50S ribosomal protein L15
L1_007_122G1_scaffold_367_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10074..11276
DNA (1203bp) protein (401aa)
UPI0003D60453 related cluster n=1 Tax=unknown RepID=UPI0003D60453
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
preprotein translocase SecY subunit
L1_007_122G1_scaffold_367_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11292..11939
DNA (648bp) protein (216aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Adenylate kinase n=2 Tax=Clostridiales RepID=B0A6D0_9FIRM
adk; adenylate kinase
L1_007_122G1_scaffold_367_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11943..12689
DNA (747bp) protein (249aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
map1; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Clostridiales RepID=B0A6D1_9FIRM
L1_007_122G1_scaffold_367_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12877..13095
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Clostridiales RepID=B0A6D2_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
infA; translation initiation factor IF-1
L1_007_122G1_scaffold_367_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13126..13239
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1T1_9CLOT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
rpmJ; 50S ribosomal protein L36
L1_007_122G1_scaffold_367_28
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13390..13761
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=2 Tax=Clostridiales RepID=B0A6D3_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
rpsM; 30S ribosomal protein S13
L1_007_122G1_scaffold_367_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13788..14186
DNA (399bp) protein (133aa)
30S ribosomal protein S11 n=2 Tax=Clostridiales RepID=B0A6D4_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
30S ribosomal protein S11
L1_007_122G1_scaffold_367_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14205..14825
DNA (621bp) protein (207aa)
30S ribosomal protein S4 n=2 Tax=Clostridiales RepID=B0A6D5_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
rpsD; 30S ribosomal protein S4
Displaying items 1-30 of 53 in total

View Taxonomy