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L1_007_122G1_scaffold_374

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_374_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..519)
DNA (519bp) protein (173aa)
Peptidase C26 n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9S4_BIFBA
peptidase C26
Peptidase C26 {ECO:0000313|EMBL:AEF27477.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(657..1142)
DNA (486bp) protein (162aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0E7_BIFBR
Putative cytidine deaminase {ECO:0000313|EMBL:AEF26468.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1233..1589
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9S2_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27968.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1694..2296
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BP70_BIFBR
Hypothetical protein, putative transglutaminase, possible cysteine protease
Uncharacterized protein {ECO:0000313|EMBL:EFE89457.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_374_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2473..2829)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZXJ8_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD74772.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_374_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2816..3109)
DNA (294bp) protein (98aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZDH4_BIFBR
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EPD74773.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
relB; Hypothetical protein
L1_007_122G1_scaffold_374_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3453..4136
DNA (684bp) protein (228aa)
Phosphoglycerate mutase family protein n=4 Tax=Bifidobacterium breve RepID=F6C9R8_BIFBA
phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:AEF26743.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4219..4602
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZLC7_BIFBR
putative, possibly secreted protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87506.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_374_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4602..4838
DNA (237bp) protein (79aa)
Uncharacterized protein n=6 Tax=Bifidobacterium breve RepID=F6C9R6_BIFBA
Conserved hypothetical, possibly secreted protein
Putative, possibly secreted protein {ECO:0000313|EMBL:AHJ21069.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_374_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4934..7612
DNA (2679bp) protein (893aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Alanine--tRNA ligase n=2 Tax=Bifidobacterium breve RepID=F9XZK4_BIFBU
Alanyl-tRNA synthetase
L1_007_122G1_scaffold_374_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7621..8073
DNA (453bp) protein (151aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Putative Holliday junction resolvase n=3 Tax=Bifidobacterium breve RepID=F6C9R4_BIFBA
RNAse H domain protein, YqgF family
L1_007_122G1_scaffold_374_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8086..9273
DNA (1188bp) protein (396aa)
YceG family protein n=2 Tax=Bifidobacterium breve RepID=F6C9R3_BIFBA
pabC; Conserved hypothetical protein with aminodeoxychorismate lyase domain
YceG family protein {ECO:0000313|EMBL:AEF27360.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9373..9846)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZLC5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75175.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative TadV type IV secretion peptidase
L1_007_122G1_scaffold_374_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9895..11082
DNA (1188bp) protein (396aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Chorismate synthase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CAN7_BIFBR
Chorismate synthase
L1_007_122G1_scaffold_374_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11117..12739
DNA (1623bp) protein (541aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:EFE89469.1}; EC=4.2.3.4 {ECO:0000313|EMBL:EFE89469.1};; Shikimate kinase/3-dehydroquinate synthase {ECO:0000313|EMBL:BAQ99902.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
aroB; Shikimate kinase/3-dehydroquinate synthase (EC:2.7.1.71 4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BP82_BIFBR
L1_007_122G1_scaffold_374_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12891..13337
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
3-dehydroquinate dehydratase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZL0_BIFBU
3-dehydroquinate dehydratase
L1_007_122G1_scaffold_374_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13457..15121
DNA (1665bp) protein (555aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
CTP synthase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BP85_BIFBR
CTP synthase
L1_007_122G1_scaffold_374_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15282..16910
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BP86_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89473.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein with ErfK/YbiS/YcfS/YnhG domain
L1_007_122G1_scaffold_374_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17089..18588
DNA (1500bp) protein (500aa)
FeS assembly protein SufB n=5 Tax=Bifidobacterium breve RepID=F6C9Q6_BIFBA
FeS assembly protein SufB
FeS assembly protein SufB {ECO:0000313|EMBL:AEF28049.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18594..19829
DNA (1236bp) protein (412aa)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZL4_BIFBU
ATP-binding protein of ABC transporter system
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE95592.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_374_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19856..20635
DNA (780bp) protein (260aa)
FeS assembly ATPase SufC n=6 Tax=Bifidobacterium breve RepID=F6C9Q4_BIFBA
FeS assembly protein SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AEF27914.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20804..22078
DNA (1275bp) protein (425aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Cysteine desulfurase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C9Q3_BIFBA
cysteine desulfurase, SufS family
L1_007_122G1_scaffold_374_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22090..22644
DNA (555bp) protein (185aa)
SUF system FeS assembly protein, NifU family n=5 Tax=Bifidobacterium breve RepID=F6C9Q2_BIFBA
IscU protein
NifU family SUF system FeS assembly protein {ECO:0000313|EMBL:EPD75165.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_374_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22652..23236
DNA (585bp) protein (195aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C9Q1_BIFBA
Hypothetical protein with DUF59 domain
Uncharacterized protein {ECO:0000313|EMBL:ERI87543.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_374_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23355..24599)
DNA (1245bp) protein (415aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Glucose-1-phosphate adenylyltransferase n=4 Tax=Bifidobacterium breve RepID=F6C9Q0_BIFBA
Glucose-1-phosphate adenylyltransferase
L1_007_122G1_scaffold_374_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24803..25681)
DNA (879bp) protein (293aa)
SpoU rRNA methylase family protein n=5 Tax=Bifidobacterium breve RepID=F9XZM0_BIFBU
SpoU rRNA methylase family protein
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ERI87540.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_374_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25888..26721
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZM1_BIFBU
Hypothetical protein with DUF558 domain, RNA methyl transferase
L1_007_122G1_scaffold_374_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26832..27170
DNA (339bp) protein (113aa)
Histidine triad domain protein n=6 Tax=Bifidobacterium breve RepID=F6C9P7_BIFBA
HIT family protein
Histidine triad domain protein {ECO:0000313|EMBL:AEF27661.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_374_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27189..28373
DNA (1185bp) protein (395aa)
PhoH family protein n=2 Tax=Bifidobacterium breve RepID=F6C9P6_BIFBA
PhoH protein
PhoH protein {ECO:0000313|EMBL:AHJ21089.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_374_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28363..28914
DNA (552bp) protein (184aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Endoribonuclease YbeY n=5 Tax=Bifidobacterium breve RepID=F9XZM4_BIFBU
Conserved hypothetical protein in uncharacterized protein family UPF0054
Displaying items 1-30 of 39 in total

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