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L1_007_122G1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_378_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1255
DNA (1254bp) protein (418aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Dihydroxy-acid dehydratase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7T7_BIFBA
Dihydroxy-acid dehydratase
L1_007_122G1_scaffold_378_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1548..2561)
DNA (1014bp) protein (338aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Methionyl-tRNA formyltransferase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7T8_BIFBA
Methionyl-tRNA formyltransferase
L1_007_122G1_scaffold_378_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2700..3404)
DNA (705bp) protein (235aa)
Haloacid dehalogenase-like hydrolase (HAD superfamily) n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2I6_BIFBU
Haloacid dehalogenase-like hydrolase (HAD superfamily)
Haloacid dehalogenase-like hydrolase (HAD superfamily) {ECO:0000313|EMBL:ABE96068.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_378_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3554..5863)
DNA (2310bp) protein (770aa)
Primosomal protein N n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7U0_BIFBA
Primosomal protein N {ECO:0000313|EMBL:AEF26337.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
primosomal protein N'
L1_007_122G1_scaffold_378_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5911..6633)
DNA (723bp) protein (241aa)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:AEF27185.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AEF27185.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phosphoserine phosphatase SerB n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L227_BIFBR
Phosphoserine phosphatase
L1_007_122G1_scaffold_378_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6684..7379
DNA (696bp) protein (232aa)
Membrane protein DedA family protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L228_BIFBR
DedA family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75728.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_378_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7433..9007
DNA (1575bp) protein (525aa)
Proteasome ATPase n=2 Tax=Bifidobacterium breve RepID=F6C7U3_BIFBA
AAA family ATPase
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_378_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9067..9780)
DNA (714bp) protein (238aa)
HAD hydrolase, family IA, variant 3 n=3 Tax=Bifidobacterium breve RepID=F6C7U4_BIFBA
Haloacid dehalogenase-like hydrolase (HAD superfamily)
Haloacid dehalogenase-like hydrolase (HAD superfamily) {ECO:0000313|EMBL:AHJ21555.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_378_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10024..11517
DNA (1494bp) protein (498aa)
PRD domain protein n=2 Tax=Bifidobacterium breve RepID=F6C7U5_BIFBA
Transcription antiterminator, BglG family
Transcription antiterminator, BglG family {ECO:0000313|EMBL:AHJ19757.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_378_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11514..11942
DNA (429bp) protein (143aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Bifidobacterium breve RepID=F6C7U6_BIFBA
Nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein
Nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein {ECO:0000313|EMBL:AHJ19756.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_378_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11986..12456
DNA (471bp) protein (157aa)
PTS system, fructose subfamily, IIA component n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZG84_BIFBR
PTS system, fructose subfamily, IIA component {ECO:0000313|EMBL:EPD75723.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
PTS system, fructose-like IIA component
L1_007_122G1_scaffold_378_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12507..12818
DNA (312bp) protein (104aa)
PTS system, fructose-like IIB component n=2 Tax=Bifidobacterium breve RepID=F9Y2H7_BIFBU
PTS system, fructose-like IIB component
PTS system, fructose-like IIB component {ECO:0000313|EMBL:AHJ19754.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_378_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12870..13988
DNA (1119bp) protein (373aa)
PTS system, fructose-like enzyme IIC component {ECO:0000313|EMBL:ABE96058.1}; EC=2.7.1.69 {ECO:0000313|EMBL:ABE96058.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
PTS system, fructose-like enzyme IIC component n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2H6_BIFBU
PTS system, fructose-like enzyme IIC component
L1_007_122G1_scaffold_378_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14166..14882
DNA (717bp) protein (239aa)
Putative ribulose-phosphate 3-epimerase n=2 Tax=Bifidobacterium breve RepID=F6C7U9_BIFBA
Ribulose-phosphate 3-epimerase
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:AHJ21549.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_378_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14985..16658
DNA (1674bp) protein (558aa)
Proteasome accessory factor PafA2 {ECO:0000313|EMBL:EFE88781.1}; EC=6.3.2.- {ECO:0000313|EMBL:EFE88781.1};; Uncharacterized protein {ECO:0000313|EMBL:BAR00478.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Proteasome accessory factor PafA2 n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRD6_BIFBR
Hypothetical protein with DUF275 domain
L1_007_122G1_scaffold_378_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16664..17566
DNA (903bp) protein (301aa)
Inositol monophosphatase family protein n=6 Tax=Bifidobacterium breve RepID=F9Y2H3_BIFBU
Inositol monophosphatase family protein
Inositol monophosphatase family protein {ECO:0000313|EMBL:AHJ21547.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_378_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17676..17873
DNA (198bp) protein (66aa)
Ubiquitin-like protein Pup n=6 Tax=Bifidobacterium breve RepID=F6C7V2_BIFBA
Hypothetical protein with DUF797 domain
Ubiquitin-like protein Pup {ECO:0000313|EMBL:AEF26371.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_378_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17873..19360
DNA (1488bp) protein (496aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Pup--protein ligase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVK9_BIFBR
Hypothetical protein with DUF275 domain
L1_007_122G1_scaffold_378_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19471..19752)
DNA (282bp) protein (94aa)
DNA-binding protein HB1 n=6 Tax=Bifidobacterium breve RepID=F6C7V4_BIFBA
DNA-binding protein HU
DNA-binding protein HB1 {ECO:0000313|EMBL:ERI88092.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_378_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19890..22454)
DNA (2565bp) protein (855aa)
membrane protein n=1 Tax=Bifidobacterium breve RepID=UPI0002DA67CD
Hypothetical membrane spanning protein in uncharacterized protein UPF0104 family
Hypothetical membrane spanning protein in uncharacterized protein UPF0104 family {ECO:0000313|EMBL:AHJ19747.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_378_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22527..23963)
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase n=4 Tax=Bifidobacterium breve RepID=S2ZG75_BIFBR
Adenylosuccinate lyase
Adenylosuccinate lyase {ECO:0000313|EMBL:AHJ19746.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_378_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24096..24740
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7V7_BIFBA
Permease protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD75712.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_378_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24767..26347)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L238_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE88789.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_378_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26779..27351)
DNA (573bp) protein (191aa)
Conserved hypothetical secreted protein n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2G4_BIFBU
Conserved hypothetical secreted protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:ABE96046.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_378_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27348..28385)
DNA (1038bp) protein (346aa)
von Willebrand factor type A domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7W0_BIFBA
putative membrane spanning protein with a von Willebrand factor type A domain
Putative membrane spanning protein with a von Willebrand factor type A domain {ECO:0000313|EMBL:AHJ21539.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_378_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28382..29437)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVJ8_BIFBR
putative membrane spanning protein
Putative membrane spanning protein {ECO:0000313|EMBL:AHJ19741.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_378_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29437..29979)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C7W2_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21537.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_378_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29976..30920)
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C7W3_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27815.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_378_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30917..31996)
DNA (1080bp) protein (360aa)
ATPase family associated with various cellular activities (AAA) n=2 Tax=Bifidobacterium breve RepID=F6C7W4_BIFBA
moxR2; MoxR protein
MoxR protein {ECO:0000313|EMBL:ABE96041.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_378_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32035..32724)
DNA (690bp) protein (230aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Uracil-DNA glycosylase n=3 Tax=Bifidobacterium breve RepID=F6C7W5_BIFBA
Uracil-DNA glycosylase
Displaying items 1-30 of 33 in total

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