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L1_007_122G1_scaffold_384

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_384_1
unknown

Not on your lists

1..156
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_122G1_scaffold_384_2
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

547..2124
DNA (1578bp) protein (526aa)
Recombinase n=1 Tax=Clostridium sp. CAG:798 RepID=R6XL45_9CLOT
Recombinase {ECO:0000313|EMBL:CDD16991.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
recombinase
L1_007_122G1_scaffold_384_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2702..3499
DNA (798bp) protein (266aa)
Uncharacterized protein n=2 Tax=root RepID=R5MHV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91003.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L1_007_122G1_scaffold_384_4
unknown

Not on your lists

3504..7610
DNA (4107bp) protein (1369aa)

This feature has no annotations

L1_007_122G1_scaffold_384_5
unknown

Not on your lists

7645..8118
DNA (474bp) protein (158aa)

This feature has no annotations

L1_007_122G1_scaffold_384_6
unknown

Not on your lists

8219..8740
DNA (522bp) protein (174aa)

This feature has no annotations

L1_007_122G1_scaffold_384_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8835..9308
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N067_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90986.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L1_007_122G1_scaffold_384_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9417..10298
DNA (882bp) protein (294aa)
Putative hemagglutination activity domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MHQ8_9FIRM
Putative hemagglutination activity domain protein {ECO:0000313|EMBL:CCY90983.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L1_007_122G1_scaffold_384_9
unknown

Not on your lists

10435..10587
DNA (153bp) protein (51aa)

This feature has no annotations

L1_007_122G1_scaffold_384_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10584..12149
DNA (1566bp) protein (522aa)
Recombinase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DWA7_9FIRM
Recombinase {ECO:0000313|EMBL:CCX83204.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
site-specific recombinase, DNA invertase Pin
L1_007_122G1_scaffold_384_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12261..12515)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I9Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42266.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_384_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12512..12778)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T2U7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66500.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_122G1_scaffold_384_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

12986..13669
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72729.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L1_007_122G1_scaffold_384_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13993..16464
DNA (2472bp) protein (824aa)
NPCBM/NEW2 domain protein n=1 Tax=Clostridium sp. D5 RepID=F0Z437_9CLOT
NPCBM/NEW2 domain protein {ECO:0000313|EMBL:EGB91150.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
pectin lyase fold-containing protein
L1_007_122G1_scaffold_384_15
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16509..17756
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DND4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89080.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L1_007_122G1_scaffold_384_16
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17848..19878
DNA (2031bp) protein (677aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CNE2_9CLOT
L1_007_122G1_scaffold_384_17
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20160..20960
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031D78B3
Uncharacterized protein {ECO:0000313|EMBL:EQB85878.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
transcriptional regulatory protein
L1_007_122G1_scaffold_384_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21106..21891)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NF61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC09775.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
RNA-binding protein S4
L1_007_122G1_scaffold_384_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22216..22533
DNA (318bp) protein (106aa)
TrpR family protein YerC/YecD n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HU79_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CDB41423.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
TrpR-related protein YerC/YecD
L1_007_122G1_scaffold_384_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22575..23333
DNA (759bp) protein (253aa)
Methyltransferase domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITW2_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDB41422.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
type 11 methyltransferase
L1_007_122G1_scaffold_384_21
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23334..24212
DNA (879bp) protein (293aa)
33 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DME7_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Hsp33 protein
L1_007_122G1_scaffold_384_22
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25115..25498
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GJK8_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35843.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_007_122G1_scaffold_384_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25971..26231
DNA (261bp) protein (87aa)
Helix-turn-helix n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6E1_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC16239.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Helix-turn-helix.
L1_007_122G1_scaffold_384_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26451..26810)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11615.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_007_122G1_scaffold_384_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27017..27727)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL74200.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, GntR family
L1_007_122G1_scaffold_384_26
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27992..28660
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ23_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:KJF38359.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hydrogenase accessory protein HypB
L1_007_122G1_scaffold_384_27
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28675..31401
DNA (2727bp) protein (909aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KUJ7_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDS08072.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L1_007_122G1_scaffold_384_28
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31406..31750
DNA (345bp) protein (115aa)
Hydrogenase nickel insertion protein HypA n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ21_9FIRM
Hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:EHL74197.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L1_007_122G1_scaffold_384_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31764..32861
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ20_9FIRM
Membrane protein {ECO:0000313|EMBL:KJF38361.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_384_30
unknown

Not on your lists

32858..32974
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy