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L1_007_122G1_scaffold_386

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_386_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(82..474)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=2 Tax=Clostridium RepID=D3ACH4_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
SSU ribosomal protein S9P
L1_007_122G1_scaffold_386_2
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(501..935)
DNA (435bp) protein (145aa)
50S ribosomal protein L13 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACH5_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L13
L1_007_122G1_scaffold_386_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1107..2171)
DNA (1065bp) protein (355aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
tRNA pseudouridine synthase A n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACH6_9CLOT
tRNA pseudouridine synthase A
L1_007_122G1_scaffold_386_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2188..2988)
DNA (801bp) protein (267aa)
Cobalt transport protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACH7_9CLOT
Cobalt transport protein {ECO:0000313|EMBL:EFD00486.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
cobalt transport protein
L1_007_122G1_scaffold_386_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2982..3881)
DNA (900bp) protein (300aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Cobalt ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=D3ACH8_9CLOT
ABC transporter
L1_007_122G1_scaffold_386_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3871..4776)
DNA (906bp) protein (302aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=D3ACH9_9CLOT
ABC transporter
L1_007_122G1_scaffold_386_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5012..6031)
DNA (1020bp) protein (340aa)
Cell wall-binding repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACI1_9CLOT
Cell wall-binding repeat protein {ECO:0000313|EMBL:EFD00490.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
cell wall binding repeat-containing protein
L1_007_122G1_scaffold_386_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6058..7290)
DNA (1233bp) protein (411aa)
Choline binding protein A n=3 Tax=Clostridium RepID=R5U345_9CLOT
Choline binding protein A {ECO:0000313|EMBL:CCZ63517.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cell wall binding repeat-containing protein
L1_007_122G1_scaffold_386_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7473..8540)
DNA (1068bp) protein (356aa)
5'-3' exonuclease, SAM domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACI4_9CLOT
5'-3' exonuclease, SAM domain protein {ECO:0000313|EMBL:EFD00473.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
5'-3' exonuclease
L1_007_122G1_scaffold_386_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8583..9077)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACI5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00474.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_386_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9379..9915)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=2 Tax=Clostridium RepID=D3ACI6_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L17
L1_007_122G1_scaffold_386_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10010..10978)
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TD20_9CLOT
DNA-directed RNA polymerase subunit alpha
L1_007_122G1_scaffold_386_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11096..11689)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=2 Tax=Clostridium RepID=D3ACI8_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
30S ribosomal protein S4
L1_007_122G1_scaffold_386_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11706..12107)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=3 Tax=Clostridium RepID=D9QZN4_CLOSW
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_386_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12227..12595)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=2 Tax=Clostridium RepID=D3ACJ0_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
30S ribosomal protein S13
L1_007_122G1_scaffold_386_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12922..13140)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Clostridium RepID=D3ACJ1_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
translation initiation factor IF-1
L1_007_122G1_scaffold_386_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13174..13440)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00442.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_386_18
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13461..14225)
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Methionine aminopeptidase n=2 Tax=Clostridium RepID=D3ACJ3_9CLOT
methionine aminopeptidase
L1_007_122G1_scaffold_386_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14229..14873)
DNA (645bp) protein (215aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Adenylate kinase n=2 Tax=Clostridium RepID=D3ACJ4_9CLOT
adenylate kinase
L1_007_122G1_scaffold_386_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14957..16279)
DNA (1323bp) protein (441aa)
Protein translocase subunit SecY n=2 Tax=Clostridium RepID=D3ACJ5_9CLOT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
preprotein translocase subunit SecY
L1_007_122G1_scaffold_386_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16281..16721)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=Clostridium RepID=D3ACJ6_9CLOT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L15
L1_007_122G1_scaffold_386_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16747..16929)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=2 Tax=Clostridium RepID=D3ACJ7_9CLOT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
LSU ribosomal protein L30P
L1_007_122G1_scaffold_386_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16943..17452)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=2 Tax=Clostridium RepID=D3ACJ8_9CLOT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
30S ribosomal protein S5
L1_007_122G1_scaffold_386_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17472..17840)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ACJ9_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
50S ribosomal protein L18
L1_007_122G1_scaffold_386_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17859..18401)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=2 Tax=Clostridium RepID=R5TX40_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L6
L1_007_122G1_scaffold_386_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18468..18869)
DNA (402bp) protein (134aa)
Ribosomal protein S8 n=2 Tax=Clostridium RepID=D3ACK1_9CLOT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
30S ribosomal protein S8
L1_007_122G1_scaffold_386_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19108..19293)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=18 Tax=Clostridium RepID=D9QZP8_CLOSW
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_007_122G1_scaffold_386_28
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19309..19848)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Clostridium RepID=D3ACK3_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L5
L1_007_122G1_scaffold_386_29
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19870..20175)
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=2 Tax=Clostridium RepID=D3ACK4_9CLOT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
50S ribosomal protein L24
L1_007_122G1_scaffold_386_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20189..20557)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Clostridium RepID=D3ACK5_9CLOT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
50S ribosomal protein L14
Displaying items 1-30 of 49 in total

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