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L1_007_122G1_scaffold_404

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_404_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1068
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Leptotrichia sp. oral taxon 879 str. F0557 RepID=U2RD19_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:ERI65123.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_404_2
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1055..1615
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FNM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95796.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L1_007_122G1_scaffold_404_3
unknown

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1752..1847
DNA (96bp) protein (32aa)

This feature has no annotations

L1_007_122G1_scaffold_404_4
Streptococcus sp. HSISS3, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2176..2526
DNA (351bp) protein (117aa)
Uncharacterized protein n=4 Tax=Streptococcus RepID=T0V0E5_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EQC72843.1}; TaxID=1316412 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS3.;"
hypothetical protein
L1_007_122G1_scaffold_404_5
Streptococcus sp. C150, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2559..2897
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Streptococcus RepID=E9DQA6_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EFX54113.1}; TaxID=435842 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. C150.;"
hypothetical protein
L1_007_122G1_scaffold_404_6
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2910..3470
DNA (561bp) protein (187aa)
UPF0340 protein HMPREF0848_01783 n=2 Tax=Streptococcus RepID=E9DQA7_9STRE
UPF0340 protein PS4_65580 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
hypothetical protein
L1_007_122G1_scaffold_404_7
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3526..4266)
DNA (741bp) protein (247aa)
Putative transcriptional regulator n=1 Tax=Streptococcus salivarius PS4 RepID=I0QKP6_STRSL
Putative transcriptional regulator {ECO:0000313|EMBL:EIC81856.1}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
treR; trehalose operon transcriptional repressor
L1_007_122G1_scaffold_404_8
Streptococcus sp. HSISS1, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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4393..6342
DNA (1950bp) protein (650aa)
PTS system, trehalose-specific IIA, IIB, and IIC component {ECO:0000313|EMBL:EQC63373.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQC63373.1};; TaxID=1316410 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS1.;"
PTS system, trehalose-specific IIA, IIB, and IIC component n=2 Tax=Streptococcus RepID=T0SXC7_9STRE
PTS system trehalose-specific transporter subunits IIBCA
L1_007_122G1_scaffold_404_9
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6403..8028
DNA (1626bp) protein (542aa)
treA; trehalose-6-phosphate hydrolase (EC:3.2.1.93)
Trehalose-6-phosphate hydrolase (Alpha,alpha-phosphotrehalase) {ECO:0000313|EMBL:CCB94270.1}; EC=3.2.1.93 {ECO:0000313|EMBL:CCB94270.1};; TaxID=1048332 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius (strain CCHSS3).;"
Trehalose-6-phosphate hydrolase (Alpha,alpha-phosphotrehalase) n=1 Tax=Streptococcus salivarius (strain CCHSS3) RepID=F8LLQ0_STREH
L1_007_122G1_scaffold_404_10
Streptococcus sp. HSISS3, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8110..10005
DNA (1896bp) protein (632aa)
Neutral endopeptidase O {ECO:0000313|EMBL:EQC72838.1}; EC=3.4.24.- {ECO:0000313|EMBL:EQC72838.1};; TaxID=1316412 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS3.;"
Neutral endopeptidase O n=1 Tax=Streptococcus sp. HSISS3 RepID=T0V0E2_9STRE
endopeptidase
L1_007_122G1_scaffold_404_11
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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10146..12734
DNA (2589bp) protein (863aa)
adhE; aldehyde-alcohol dehydrogenase 2 (EC:1.2.1.10)
Putative alcohol-acetaldehyde dehydrogenase n=1 Tax=Streptococcus salivarius PS4 RepID=I0QKP9_STRSL
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
L1_007_122G1_scaffold_404_12
Streptococcus sp. HSISS2, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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12896..13738
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Streptococcus sp. HSISS2 RepID=T0TLF9_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EQC71632.1}; TaxID=1316411 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS2.;"
hypothetical protein
L1_007_122G1_scaffold_404_13
Streptococcus sp. C150, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13768..14739
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Streptococcus salivarius (strain 57.I) RepID=F8HEK0_STRE5
Uncharacterized protein {ECO:0000313|EMBL:EFX54120.1}; TaxID=435842 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. C150.;"
hypothetical protein
L1_007_122G1_scaffold_404_14
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14902..16386
DNA (1485bp) protein (495aa)
thrc; threonine synthase (TS) (EC:4.2.3.1)
Threonine synthase n=2 Tax=Streptococcus RepID=E9DQB4_9STRE
Putative threonine synthase {ECO:0000313|EMBL:EIC81892.1}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
L1_007_122G1_scaffold_404_15
Streptococcus sp. HSISS3, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16446..17732
DNA (1287bp) protein (429aa)
Multi antimicrobial extrusion (MATE) family transporter n=1 Tax=Streptococcus sp. HSISS3 RepID=T0TPA9_9STRE
Multi antimicrobial extrusion (MATE) family transporter {ECO:0000313|EMBL:EQC72831.1}; TaxID=1316412 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS3.;"
Na+-driven multidrug efflux pump
L1_007_122G1_scaffold_404_16
Streptococcus sp. C150, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17843..18208
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Streptococcus RepID=E9DQB6_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EFX54123.1}; TaxID=435842 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. C150.;"
asp; putative alkaline-shock protein
L1_007_122G1_scaffold_404_17
Streptococcus sp. HSISS2, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18208..19875
DNA (1668bp) protein (556aa)
Dihydroxyacetone kinase family protein n=2 Tax=Streptococcus RepID=T0TDR5_9STRE
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EQC71625.1}; TaxID=1316411 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS2.;"
hypothetical protein
L1_007_122G1_scaffold_404_18
Streptococcus sp. C150, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20045..21766
DNA (1722bp) protein (574aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=435842 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. C150.;"
Dihydroxy-acid dehydratase n=4 Tax=Streptococcus RepID=T0UP20_9STRE
ilvD; dihydroxy-acid dehydratase
L1_007_122G1_scaffold_404_19
Streptococcus sp. HSISS3, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21901..23601
DNA (1701bp) protein (567aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1316412 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS3.;"
ilvB; acetolactate synthase (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Streptococcus RepID=T0TPR0_9STRE
L1_007_122G1_scaffold_404_20
Streptococcus sp. HSISS3, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23594..24070
DNA (477bp) protein (159aa)
Acetolactate synthase small subunit {ECO:0000313|EMBL:EQC72826.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EQC72826.1};; TaxID=1316412 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS3.;"
Acetolactate synthase small subunit n=2 Tax=Streptococcus RepID=T0TLF1_9STRE
acetolactate synthase
L1_007_122G1_scaffold_404_21
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24145..25167
DNA (1023bp) protein (341aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=2 Tax=Streptococcus RepID=E9DQC1_9STRE
L1_007_122G1_scaffold_404_22
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25335..26591)
DNA (1257bp) protein (419aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
tyrosine--tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=3 Tax=Streptococcus RepID=T0TDR1_9STRE
L1_007_122G1_scaffold_404_23
Streptococcus sp. HSISS3, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26693..29116
DNA (2424bp) protein (808aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:EQC72934.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EQC72934.1};; EC=3.4.-.- {ECO:0000313|EMBL:EQC72934.1};; TaxID=1316412 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. HSISS3.;"
Multimodular transpeptidase-transglycosylase n=3 Tax=Streptococcus RepID=T0USS5_9STRE
membrane protein
L1_007_122G1_scaffold_404_24
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29461..32574
DNA (3114bp) protein (1038aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1157946 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius PS4.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Streptococcus salivarius PS4 RepID=I0QKS3_STRSL
rpoB; DNA-directed RNA polymerase subunit beta
Displaying 24 items

View Taxonomy