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L1_007_122G1_scaffold_418

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_418_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..112
DNA (111bp) protein (37aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72791.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_418_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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132..278
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76862.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_007_122G1_scaffold_418_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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742..1059
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C7X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54652.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transposase mutator type
L1_007_122G1_scaffold_418_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1062..2081)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72788.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transposase
L1_007_122G1_scaffold_418_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2159..2500)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KG24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45181.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
transposase
L1_007_122G1_scaffold_418_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2547..3332
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72951.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_418_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3280..4095
DNA (816bp) protein (272aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6R2_9CLOT
L1_007_122G1_scaffold_418_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4155..4535
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KEQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35642.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
excisionase
L1_007_122G1_scaffold_418_9
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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4568..5338
DNA (771bp) protein (257aa)
Putative filamentation induced by cAMP protein Fic n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EK76_9FIRM
Putative filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:CDA90377.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
filamentation induced by cAMP protein Fic
L1_007_122G1_scaffold_418_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5392..6048
DNA (657bp) protein (219aa)
Toprim domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QWP2_9CLOT
Toprim domain protein {ECO:0000313|EMBL:CDC41003.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_007_122G1_scaffold_418_11
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6205..6459
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJF38178.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_418_12
unknown

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7511..7720
DNA (210bp) protein (70aa)

This feature has no annotations

L1_007_122G1_scaffold_418_13
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7769..9448)
DNA (1680bp) protein (560aa)
Resolvase, N-terminal domain protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L814_BLAHA
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEX21751.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_007_122G1_scaffold_418_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9565..9831)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XTY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18841.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L1_007_122G1_scaffold_418_15
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

10106..11314
DNA (1209bp) protein (403aa)
Putative transposase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D3R3_9FIRM
Putative transposase {ECO:0000313|EMBL:CCX71497.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
IS110, transposase
L1_007_122G1_scaffold_418_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11554..11754)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KUH9_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00422.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_007_122G1_scaffold_418_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11744..12088)
DNA (345bp) protein (115aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9VQY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ59469.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
ccrB; cassette chromosome recombinase B
L1_007_122G1_scaffold_418_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12433..12843)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I856_9CLOT
hypothetical protein
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:CBL41042.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_007_122G1_scaffold_418_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13304..14380)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99326.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_007_122G1_scaffold_418_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14377..15252)
DNA (876bp) protein (292aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXA0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99327.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type multidrug transport system, ATPase component
L1_007_122G1_scaffold_418_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15342..16520)
DNA (1179bp) protein (393aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Signal transduction histidine kinase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K803_9FIRM
Signal transduction histidine kinase
L1_007_122G1_scaffold_418_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16508..17182)
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K804_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL00967.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_007_122G1_scaffold_418_23
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17225..17410)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RJ03_9ZZZZ
Transposase {ECO:0000313|EMBL:KJF39572.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_007_122G1_scaffold_418_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

17563..17919
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XTL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13034.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Helix-turn-helix.
L1_007_122G1_scaffold_418_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18121..19533)
DNA (1413bp) protein (471aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T5H8_ROSHA
Relaxase/mobilization nuclease family protein
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:AEN97826.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_122G1_scaffold_418_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19609..19896)
DNA (288bp) protein (96aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FQT4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97827.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_122G1_scaffold_418_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20060..20407)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNF1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08403.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_007_122G1_scaffold_418_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20404..20574)
DNA (171bp) protein (57aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C0FQT6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97829.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_122G1_scaffold_418_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20585..21184)
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C7H6R6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97830.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_007_122G1_scaffold_418_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21198..22154)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNF3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08405.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Displaying items 1-30 of 42 in total

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