ggKbase home page

L1_007_122G1_scaffold_429

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_429_1
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..424)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67242.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
metallophosphoesterase
L1_007_122G1_scaffold_429_2
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(452..1045)
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67242.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
metallophosphoesterase
L1_007_122G1_scaffold_429_3
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1059..2744)
-----------------
DNA (1686bp)
protein (562aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQZ0_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CCY69230.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L1_007_122G1_scaffold_429_4
unknown

Not on your lists

comp(2770..3048)
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

L1_007_122G1_scaffold_429_5
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3126..5030)
-----------------
DNA (1905bp)
protein (635aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67228.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_122G1_scaffold_429_6
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5086..6261)
-----------------
DNA (1176bp)
protein (392aa)
Protein containing hemopexin repeats n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1N2_9CLOT
Protein containing hemopexin repeats {ECO:0000313|EMBL:CCY67236.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L1_007_122G1_scaffold_429_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6285..8036)
-----------------
DNA (1752bp)
protein (584aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium sp. CAG:678 RepID=R5L4N1_9CLOT
Beta-galactosidase {ECO:0000313|EMBL:CCY68276.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L1_007_122G1_scaffold_429_8
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8047..9894)
-----------------
DNA (1848bp)
protein (616aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN39423.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_122G1_scaffold_429_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10015..11169)
-----------------
DNA (1155bp)
protein (385aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B9X2_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERI68628.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_007_122G1_scaffold_429_10
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11187..12173)
-----------------
DNA (987bp)
protein (329aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKF0_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CCY67233.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
metallophosphoesterase
L1_007_122G1_scaffold_429_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12249..13868)
-----------------
DNA (1620bp)
protein (540aa)
Alpha-1 3-galactosidase A domain protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KKF6_9CLOT
Alpha-1 3-galactosidase A domain protein {ECO:0000313|EMBL:CCY67238.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
alpha-galactosidase
L1_007_122G1_scaffold_429_12
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13865..15166)
-----------------
DNA (1302bp)
protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2D0C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI72996.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L1_007_122G1_scaffold_429_13
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15166..16209)
-----------------
DNA (1044bp)
protein (348aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:678 RepID=R5L1M6_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CCY67226.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L1_007_122G1_scaffold_429_14
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16209..18407)
-----------------
DNA (2199bp)
protein (733aa)
Alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1 2-fucosidase 2) n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2F9_9CLOT
Alpha-L-fucosidase 2 (Alpha-L-fucosidefucohydrolase 2) (Alpha-1 2-fucosidase 2) {ECO:0000313|EMBL:CCY67237.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
alpha-L-fucosidase
L1_007_122G1_scaffold_429_15
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18412..19875)
-----------------
DNA (1464bp)
protein (488aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase Fuc29A n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5X846_9FIRM
Alpha-L-fucosidase Fuc29A {ECO:0000313|EMBL:CDA11833.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
L1_007_122G1_scaffold_429_16
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19910..22933)
-----------------
DNA (3024bp)
protein (1008aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046490}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046490};; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RG72_9BACE
glycoside hydrolase family protein
L1_007_122G1_scaffold_429_17
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22967..24031)
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JNE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32662.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
adh1; Adh
L1_007_122G1_scaffold_429_18
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24028..25023)
-----------------
DNA (996bp)
protein (332aa)
dkgA; 2,5-diketo-D-gluconic acid reductase A (EC:1.1.1.274)
aldehyde oxidoreductase n=1 Tax=Blautia producta RepID=UPI00035E6DC9
Alcohol dehydrogenase [NADP+] (Aldehyde reductase) (Aldo-keto reductase family 1 member a1) {ECO:0000313|EMBL:CCX39011.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_007_122G1_scaffold_429_19
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25092..26081)
-----------------
DNA (990bp)
protein (330aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Sugar-binding domain protein n=2 Tax=Clostridium RepID=A7VN89_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:EDO63196.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_007_122G1_scaffold_429_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26362..27084
-----------------
DNA (723bp)
protein (241aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7S5_9FIRM
L1_007_122G1_scaffold_429_21
unknown

Not on your lists

comp(27162..27935)
-----------------
DNA (774bp)
protein (258aa)

This feature has no annotations

L1_007_122G1_scaffold_429_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28041..28886)
-----------------
DNA (846bp)
protein (282aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=2 Tax=Oscillibacter RepID=U2QS05_9FIRM
L1_007_122G1_scaffold_429_23
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28943..29875)
-----------------
DNA (933bp)
protein (311aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FZ85_9FIRM
protein of unknown function DUF1848
Uncharacterized protein {ECO:0000313|EMBL:AIF52538.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
L1_007_122G1_scaffold_429_24
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(29872..30387)
-----------------
DNA (516bp)
protein (172aa)
Thioesterase superfamily protein id=4182988 bin=GWF2_Clostridiales_38_85 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
thioesterase superfamily protein
Tax=GWF2_Clostridiales_38_85_curated
L1_007_122G1_scaffold_429_25
unknown

Not on your lists

30668..30769
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

Displaying 25 items

View Taxonomy