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L1_007_122G1_scaffold_443

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_443_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11..982)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=I3ARG8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ21711.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hemagglutinin
L1_007_122G1_scaffold_443_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(979..5115)
DNA (4137bp) protein (1379aa)
ATP-dependent helicase HrpA n=6 Tax=Bifidobacterium RepID=D6DCP8_BIFLN
ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:AAN25105.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_443_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5105..5761)
DNA (657bp) protein (219aa)
16S rRNA m(2)G 1207 methyltransferase (EC:2.1.1.171)
16S RNA G1207 methylase n=3 Tax=Bifidobacterium longum RepID=B3DQB0_BIFLD
16S RNA G1207 methylase {ECO:0000313|EMBL:ACD97609.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_443_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5920..7425
DNA (1506bp) protein (502aa)
GTPase HflX n=2 Tax=Bifidobacterium longum RepID=B3DQB1_BIFLD
hflX; hflx
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_007_122G1_scaffold_443_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7606..8568
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L-lactate dehydrogenase 2 n=19 Tax=Bifidobacterium RepID=LDH2_BIFL2
L-lactate dehydrogenase
L1_007_122G1_scaffold_443_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8710..9648)
DNA (939bp) protein (313aa)
Cation efflux protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AP69_BIFLN
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:AEI97222.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_007_122G1_scaffold_443_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9814..10539)
DNA (726bp) protein (242aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
LexA repressor n=13 Tax=Bifidobacterium longum RepID=LEXA_BIFLD
lexA1; lexa1
L1_007_122G1_scaffold_443_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10690..11040
DNA (351bp) protein (117aa)
LysM-like protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQB5_BIFLD
peptidoglycan-binding protein LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:BAP83873.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_007_122G1_scaffold_443_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11057..11533
DNA (477bp) protein (159aa)
Transcriptional repressor NrdR n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ66_BIFLS
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
nrdR; transcriptional regulator NrdR
L1_007_122G1_scaffold_443_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11668..12867)
DNA (1200bp) protein (400aa)
D-3-phosphoglycerate dehydrogenase n=11 Tax=Bifidobacterium RepID=E8ME23_BIFL2
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:AAN25113.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_443_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12878..15157)
DNA (2280bp) protein (760aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Superfamily I DNA and RNA helicase n=11 Tax=Bifidobacterium longum RepID=B3DQB8_BIFLD
Superfamily I DNA and RNA helicases
L1_007_122G1_scaffold_443_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15490..16011
DNA (522bp) protein (174aa)
MraZ n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1W2_BIFLM
hypothetical protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_007_122G1_scaffold_443_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16011..17090
DNA (1080bp) protein (360aa)
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Ribosomal RNA small subunit methyltransferase H n=2 Tax=Bifidobacterium RepID=D6DCQ6_BIFLN
L1_007_122G1_scaffold_443_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17097..17546
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=V6XXB9_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KEY31509.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
hypothetical protein
L1_007_122G1_scaffold_443_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17543..19345
DNA (1803bp) protein (601aa)
Peptidoglycan synthase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AP79_BIFLN
Peptidoglycan synthase {ECO:0000313|EMBL:AEI97232.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
peptidoglycan synthase
L1_007_122G1_scaffold_443_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19372..20244
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G4Q9_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY25633.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_007_122G1_scaffold_443_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20293..21744
DNA (1452bp) protein (484aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AP81_BIFLN
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
L1_007_122G1_scaffold_443_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21789..22895
DNA (1107bp) protein (369aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=6 Tax=Bifidobacterium RepID=V6Y1U3_BIFLN
phospho-N-acetylmuramoyl-pentapeptide-transferase
L1_007_122G1_scaffold_443_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22950..24395
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=5 Tax=Bifidobacterium longum RepID=MURD_BIFLD
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L1_007_122G1_scaffold_443_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24382..25599
DNA (1218bp) protein (406aa)
Cell division protein FtsW n=5 Tax=Bifidobacterium longum RepID=C5EBR7_BIFLI
cell division protein FtsW
Cell division protein FtsW {ECO:0000313|EMBL:AIW43953.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_443_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25615..26796
DNA (1182bp) protein (394aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=15 Tax=Bifidobacterium RepID=MURG_BIFLD
N-acetylglucosaminyl transferase
L1_007_122G1_scaffold_443_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26897..28435
DNA (1539bp) protein (513aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
UDP-N-acetylmuramate--L-alanine ligase n=6 Tax=Bifidobacterium RepID=MURC_BIFLO
UDP-N-acetylmuramate--alanine ligase
L1_007_122G1_scaffold_443_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28435..29499
DNA (1065bp) protein (355aa)
Cell division protein FtsQ n=2 Tax=Bifidobacterium RepID=V6Y1T7_BIFLN
Cell division protein FtsQ {ECO:0000313|EMBL:KEY31500.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ftsQ; cell division septal protein
L1_007_122G1_scaffold_443_24
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30032..31135
DNA (1104bp) protein (368aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 n=7 Tax=Bifidobacterium RepID=D6DCR3_BIFLN
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Macro domain-containing protein {ECO:0000313|EMBL:EFV36901.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_007_122G1_scaffold_443_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31279..31965
DNA (687bp) protein (229aa)
von Willebrand factor type A domain n=8 Tax=Bifidobacterium longum RepID=D6DCR4_BIFLN
von Willebrand factor type A domain.
Uncharacterized protein {ECO:0000313|EMBL:AIW44819.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_007_122G1_scaffold_443_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32055..32543
DNA (489bp) protein (163aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
D-tyrosyl-tRNA(Tyr) deacylase n=4 Tax=Bifidobacterium RepID=DTD_BIFLS
D-tyrosyl-tRNA deacylase
L1_007_122G1_scaffold_443_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32640..34262)
DNA (1623bp) protein (541aa)
Sugar transport protein n=4 Tax=Bifidobacterium longum RepID=F8AP92_BIFLN
sugar transport protein
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEQ55502.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L1_007_122G1_scaffold_443_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34339..35235)
DNA (897bp) protein (299aa)
Sugar kinases, ribokinase family n=4 Tax=Bifidobacterium longum RepID=D6DCS5_BIFLN
PfkB domain-containing protein
Protein in PfkB family of sugar kinases {ECO:0000313|EMBL:AAN25139.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_443_29
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35308..36522)
DNA (1215bp) protein (405aa)
NagC-type transcriptional regulator n=2 Tax=Bifidobacterium RepID=B3DQQ6_BIFLD
NagC family transcriptional regulator
NagC-type transcriptional regulator {ECO:0000313|EMBL:CCY95714.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_007_122G1_scaffold_443_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36749..37663
DNA (915bp) protein (305aa)
NagC-type transcriptional regulator n=2 Tax=Bifidobacterium longum RepID=B3DQQ7_BIFLD
NagC family transcriptional regulator
NagC-type transcriptional regulator {ECO:0000313|EMBL:ACD97653.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying items 1-30 of 52 in total

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