ggKbase home page

L1_007_122G1_scaffold_449

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_449_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224..994)
DNA (771bp) protein (257aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=42 Tax=Escherichia RepID=B1IPP9_ECOLC
hypothetical protein
C-N hydrolase family amidase, NAD(P)-binding {ECO:0000313|EMBL:ESK01583.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L1_007_122G1_scaffold_449_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1148..1621
DNA (474bp) protein (158aa)
Inhibitor of vertebrate lysozyme n=1163 Tax=Enterobacteriaceae RepID=IVY_ECO57
ivy; C-lysozyme inhibitor
Inhibitor of vertebrate lysozyme {ECO:0000313|EMBL:ESA86762.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L1_007_122G1_scaffold_449_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1664..4108)
DNA (2445bp) protein (815aa)
Acyl-coenzyme A dehydrogenase n=150 Tax=Escherichia RepID=FADE_ECOLI
fadE; acyl-CoA dehydrogenase
Acyl-coenzyme A dehydrogenase {ECO:0000313|EMBL:EOW28091.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L1_007_122G1_scaffold_449_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4348..4926
DNA (579bp) protein (193aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1432555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC7.;"
Phosphoheptose isomerase n=2 Tax=Escherichia coli RepID=E9WAU9_ECOLX
gmhA; phosphoheptose isomerase
L1_007_122G1_scaffold_449_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5132..5899
DNA (768bp) protein (256aa)
Glutamine amidotransferase class-II n=105 Tax=Enterobacteriaceae RepID=B1IPP5_ECOLC
Glutamine amidotransferase class-II
Glutamine amidotransferase {ECO:0000313|EMBL:KIH33604.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_007_122G1_scaffold_449_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5870..6610)
DNA (741bp) protein (247aa)
Putative L,D-transpeptidase YafK n=1260 Tax=Enterobacteriaceae RepID=YAFK_ECO57
hypothetical protein
ErfK/YbiS/YcfS/YnhG superfamily protein {ECO:0000313|EMBL:EGI47745.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L1_007_122G1_scaffold_449_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6902..7660
DNA (759bp) protein (253aa)
Lipoprotein and C40 family peptidase n=14 Tax=Escherichia coli RepID=L3I0N1_ECOLX
Lipoprotein and C40 family peptidase {ECO:0000313|EMBL:ESK01577.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L1_007_122G1_scaffold_449_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7836..8333
DNA (498bp) protein (166aa)
Conserved protein n=21 Tax=Escherichia coli RepID=C6EA59_ECOBD
hypothetical protein
Transposase {ECO:0000313|EMBL:EOW11461.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L1_007_122G1_scaffold_449_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8557..10296)
DNA (1740bp) protein (580aa)
Flagellar biosynthesis protein FlhA n=16 Tax=Escherichia coli RepID=F4M3P2_ECOLX
flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:AEE54916.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L1_007_122G1_scaffold_449_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10391..11026
DNA (636bp) protein (212aa)
OmpA family protein n=2 Tax=Escherichia coli RepID=D7Y6K2_ECOLX
Chemotaxis protein MotB {ECO:0000313|EMBL:EOV68233.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
L1_007_122G1_scaffold_449_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11097..12152
DNA (1056bp) protein (352aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
DNA polymerase IV n=101 Tax=Escherichia coli RepID=DPO4_ECOHS
L1_007_122G1_scaffold_449_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12149..12601
DNA (453bp) protein (151aa)
Acetyltransferase, GNAT family n=14 Tax=Enterobacteriaceae RepID=D7Y6K4_ECOLX
Acetyltransferase {ECO:0000313|EMBL:EOV68235.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
acyltransferase
L1_007_122G1_scaffold_449_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12908..13174
DNA (267bp) protein (89aa)
Putative uncharacterized protein YkfJ n=158 Tax=Escherichia RepID=YKFJ_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW28101.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L1_007_122G1_scaffold_449_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13217..13474
DNA (258bp) protein (86aa)
Peptide chain release factor-like protein n=27 Tax=Escherichia coli RepID=M4JHY3_ECOLX
prfH; peptide chain release factor-like protein
Peptide chain release factor homolog domain protein {ECO:0000313|EMBL:EFK70326.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L1_007_122G1_scaffold_449_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13531..14988)
DNA (1458bp) protein (486aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Xaa-His dipeptidase n=4 Tax=Escherichia coli RepID=D7Y6K8_ECOLX
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:ELD73483.1}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
L1_007_122G1_scaffold_449_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15249..15707
DNA (459bp) protein (153aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010603}; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010679};; Xanthine-guanine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
Xanthine phosphoribosyltransferase n=972 Tax=Enterobacteriaceae RepID=XGPT_ECO24
gpt; xanthine phosphoribosyltransferase
L1_007_122G1_scaffold_449_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15799..17043
DNA (1245bp) protein (415aa)
esterase (EC:3.1.-.-)
Esterase FrsA {ECO:0000256|HAMAP-Rule:MF_01063}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01063};; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
Esterase FrsA n=266 Tax=Enterobacteriaceae RepID=FRSA_ECO55
L1_007_122G1_scaffold_449_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17101..17502
DNA (402bp) protein (134aa)
Sigma factor-binding protein Crl n=447 Tax=Enterobacteriaceae RepID=CRL_ECO24
transcriptional regulator Crl
Sigma factor-binding protein Crl {ECO:0000256|HAMAP-Rule:MF_01178, ECO:0000256|SAAS:SAAS00064594}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L1_007_122G1_scaffold_449_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17541..18596)
DNA (1056bp) protein (352aa)
Outer membrane pore protein E (E,Ic,NmpAB) n=553 Tax=Bacteria RepID=C3TNT7_ECOLX
phoE; outer membrane phosphoporin protein E
Porin {ECO:0000313|EMBL:KDV61787.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L1_007_122G1_scaffold_449_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18884..19987
DNA (1104bp) protein (368aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Glutamate 5-kinase n=40 Tax=Escherichia coli RepID=B3I3N5_ECOLX
proB; glutamate 5-kinase
L1_007_122G1_scaffold_449_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19999..21252
DNA (1254bp) protein (418aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Gamma-glutamyl phosphate reductase n=62 Tax=Escherichia coli RepID=J7QCG4_ECOLX
L1_007_122G1_scaffold_449_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21907..22893
DNA (987bp) protein (329aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=L2V970_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC11808.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
ATPase central domain-containing protein
L1_007_122G1_scaffold_449_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22902..25391
DNA (2490bp) protein (830aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=V2QN20_ECOLX
Subtilase family protein {ECO:0000313|EMBL:KDX39856.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
hypothetical protein
L1_007_122G1_scaffold_449_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25423..25521
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 50 (4-2593475) RepID=V2QRU1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK02055.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L1_007_122G1_scaffold_449_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25656..25916)
DNA (261bp) protein (87aa)
HigA family addiction module antidote protein n=2 Tax=Escherichia coli RepID=V2RWF1_ECOLX
HigA family addiction module antidote protein {ECO:0000313|EMBL:ESK02054.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
addiction module antidote protein, HigA family
L1_007_122G1_scaffold_449_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27456..27809
DNA (354bp) protein (118aa)
Protein traJ n=3 Tax=Escherichia coli RepID=N2I5J4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESK02053.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
hypothetical protein
L1_007_122G1_scaffold_449_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27891..28685
DNA (795bp) protein (265aa)
P-type conjugative transfer protein TrbJ n=5 Tax=Escherichia coli RepID=N2WIC5_ECOLX
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:ESK02052.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
P-type conjugative transfer protein TrbJ
L1_007_122G1_scaffold_449_28
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28697..28870
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=L0M9Z9_ENTBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB79506.1}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
L1_007_122G1_scaffold_449_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29063..29143)
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
Displaying 29 items

View Taxonomy