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L1_007_122G1_scaffold_457

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_457_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(67..498)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=7 Tax=Bifidobacterium RepID=RL11_BIFLS
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_457_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1307..2068
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQF8_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88453.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L1_007_122G1_scaffold_457_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2423..3250)
DNA (828bp) protein (276aa)
Transcription termination/antitermination protein NusG n=3 Tax=Bifidobacterium breve RepID=F9XYT6_BIFBU
Transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_457_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3283..3510)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=3 Tax=Bifidobacterium breve RepID=F6C822_BIFBA
secE; Preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_457_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3840..5045)
DNA (1206bp) protein (402aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C823_BIFBA
aspC; Aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AHJ21925.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5187..6449
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZH25_BIFBR
Polysaccharide deacetylase
Uncharacterized protein {ECO:0000313|EMBL:EPD76073.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_457_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6545..7645)
DNA (1101bp) protein (367aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
gamma-glutamyl kinase n=1 Tax=Bifidobacterium breve RepID=UPI00037BEFE5
Glutamate 5-kinase
L1_007_122G1_scaffold_457_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7785..9476)
DNA (1692bp) protein (564aa)
GTPase Obg n=3 Tax=Bifidobacterium breve RepID=F6C826_BIFBA
GTP-binding protein, GTP1/OBG family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9543..9794)
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=5 Tax=Bifidobacterium breve RepID=F6C827_BIFBA
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_457_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9817..10125)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=6 Tax=Bifidobacterium breve RepID=F6C828_BIFBA
LSU ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_457_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10312..13398)
DNA (3087bp) protein (1029aa)
Rne/Rng family ribonuclease n=2 Tax=Bifidobacterium breve RepID=S2ZH31_BIFBR
Ribonuclease G
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EPD76078.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_457_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13817..15022)
DNA (1206bp) protein (402aa)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AIA2_BIFBR
Succinyl-diaminopimelate desuccinylase
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EPD76079.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_457_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15128..16072
DNA (945bp) protein (315aa)
Transporter, auxin efflux carrier (AEC) family protein n=5 Tax=Bifidobacterium breve RepID=F6C831_BIFBA
Transporter
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERI87059.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_457_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16148..17041)
DNA (894bp) protein (298aa)
Dihydrodipicolinate synthase n=5 Tax=Bifidobacterium breve RepID=F9XYU7_BIFBU
Dihydrodipicolinate synthase
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AHJ21934.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17153..17920)
DNA (768bp) protein (256aa)
Amidohydrolase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2DZ91_BIFBR
Hypothetical protein
Amidohydrolase family protein {ECO:0000313|EMBL:ERI87057.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L1_007_122G1_scaffold_457_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17922..19184)
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 n=5 Tax=Bifidobacterium RepID=D6ZWK1_BIFLJ
transporter, member of MFS, possible L-fucose permease
Transporter, member of MFS, possible L-fucose permease {ECO:0000313|EMBL:AHJ21936.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19374..20165)
DNA (792bp) protein (264aa)
Short chain dehydrogenase n=7 Tax=Bifidobacterium RepID=F9XYV0_BIFBU
KR domain-containing protein
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFE88435.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_457_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20306..21589)
DNA (1284bp) protein (428aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=5 Tax=Bifidobacterium breve RepID=F6C836_BIFBA
Mandelate racemase
Mandelate racemase {ECO:0000313|EMBL:AHJ21938.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21801..22829
DNA (1029bp) protein (343aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C837_BIFBA
putative HTH-type transcriptional repressor PurR
Sugar-binding domain protein {ECO:0000313|EMBL:AEF27126.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_457_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22811..23083)
DNA (273bp) protein (91aa)
Putative efflux ABC transporter, permease protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L0W1_BIFBR
Transporter
Transporter {ECO:0000313|EMBL:AHJ20076.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_457_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23061..24134)
DNA (1074bp) protein (358aa)
Efflux ABC transporter, permease protein n=3 Tax=Bifidobacterium breve RepID=F6C838_BIFBA
Transporter
Transporter {ECO:0000313|EMBL:ABE96412.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_457_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24131..24814)
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C839_BIFBA
putative lipoprotein ABC transporter, ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ABE96413.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_457_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25080..25415
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AIB1_BIFBR
Hypothetical protein
Toxin-antitoxin system protein {ECO:0000313|EMBL:AHJ21942.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25406..25915
DNA (510bp) protein (170aa)
Toxin-antitoxin system, toxin component, GNAT family n=5 Tax=Bifidobacterium breve RepID=F6C841_BIFBA
Acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AHJ21943.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25978..27429)
DNA (1452bp) protein (484aa)
Maf protein n=2 Tax=Bifidobacterium breve RepID=F9XYV6_BIFBU
Maf protein
Septum formation protein Maf {ECO:0000313|EMBL:EFE88428.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR00790.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_457_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27581..28735)
DNA (1155bp) protein (385aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Homoserine kinase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A1M3_BIFBR
Homoserine kinase
L1_007_122G1_scaffold_457_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28815..30131)
DNA (1317bp) protein (439aa)
thrA; Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Homoserine dehydrogenase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XYV8_BIFBU
L1_007_122G1_scaffold_457_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30325..30819
DNA (495bp) protein (165aa)
PTS system, glucose-like IIB component n=4 Tax=Bifidobacterium breve RepID=D4BQD0_BIFBR
PTS system, N-acetylglucosamine-specific IIBC component
PTS system, glucose-like IIB component {ECO:0000313|EMBL:EPD76094.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_457_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30816..31319
DNA (504bp) protein (168aa)
PTS N-acetylglucosamine transporter subunit IIABC n=1 Tax=Bifidobacterium breve RepID=UPI000377BC57
PTS system, glucose-specific IIABC component
PTS system, glucose-specific IIABC component {ECO:0000313|EMBL:AHJ21948.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_457_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31414..33042)
DNA (1629bp) protein (543aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Diaminopimelate decarboxylase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BQC8_BIFBR
Diaminopimelate decarboxylase
Displaying items 1-30 of 48 in total

View Taxonomy