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L1_007_122G1_scaffold_459

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_459_1
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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99..698
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42812.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_459_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1049..1423
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42813.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_459_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1577..1981
DNA (405bp) protein (135aa)
N utilization substance protein B homolog n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8J9_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
NusB antitermination factor
L1_007_122G1_scaffold_459_4
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1981..2943
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LS10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS61575.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
peptidase M22 glycoprotease
L1_007_122G1_scaffold_459_5
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2983..4188
DNA (1206bp) protein (402aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:413 RepID=R6NXV0_9CLOT
exodeoxyribonuclease VII large subunit
L1_007_122G1_scaffold_459_6
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4263..4484
DNA (222bp) protein (74aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DW33_9FIRM
exodeoxyribonuclease 7 small subunit
L1_007_122G1_scaffold_459_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4478..5371
DNA (894bp) protein (298aa)
Polyprenyl synthetase n=1 Tax=Clostridium sp. MSTE9 RepID=J1H379_9CLOT
Polyprenyl synthetase {ECO:0000313|EMBL:EJF39970.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
polyprenyl synthetase
L1_007_122G1_scaffold_459_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5409..7292
DNA (1884bp) protein (628aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=root RepID=R5MQC5_9FIRM
deoxyxylulose-5-phosphate synthase
L1_007_122G1_scaffold_459_9
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7273..8112
DNA (840bp) protein (280aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XAM9_9FIRM
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:CDA12668.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
hemolysin A
L1_007_122G1_scaffold_459_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8119..8979
DNA (861bp) protein (287aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N2S9_9FIRM
ATP-NAD/AcoX kinase
L1_007_122G1_scaffold_459_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8976..9431
DNA (456bp) protein (152aa)
Arginine repressor n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXV7_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
arginine repressor ArgR
L1_007_122G1_scaffold_459_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9459..11138
DNA (1680bp) protein (560aa)
DNA repair protein RecN n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HY48_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
DNA repair protein RecN
L1_007_122G1_scaffold_459_13
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11299..11814
DNA (516bp) protein (172aa)
RNA polymerase sigma factor n=1 Tax=Streptococcus equi subsp. zooepidemicus (strain ATCC 35246 / C74-63) RepID=F8IMJ9_STREC
rpoE; RNA polymerase sigma-E factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1403449 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus CY.;"
L1_007_122G1_scaffold_459_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11804..12451
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA70_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08563.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L1_007_122G1_scaffold_459_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12564..13199)
DNA (636bp) protein (212aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MHD0_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
rex; putative redox-sensing transcriptional regulator
L1_007_122G1_scaffold_459_16
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13213..14382)
DNA (1170bp) protein (390aa)
Putative isocitrate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y403_9FIRM
Putative isocitrate dehydrogenase {ECO:0000313|EMBL:CDA19519.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L1_007_122G1_scaffold_459_17
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14411..16345)
DNA (1935bp) protein (645aa)
Putative aconitate hydratase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XWQ8_9FIRM
Putative aconitate hydratase {ECO:0000313|EMBL:CDA19518.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
aconitate hydratase
L1_007_122G1_scaffold_459_18
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16509..17327)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002F25414
Cof protein {ECO:0000313|EMBL:CDL92102.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
putative hydrolase
L1_007_122G1_scaffold_459_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17414..18442)
DNA (1029bp) protein (343aa)
Cell cycle protein FtsW/RodA/SpoVE family n=2 Tax=root RepID=R5MGB7_9FIRM
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CCY90508.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
cell cycle protein
L1_007_122G1_scaffold_459_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18463..18924)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34600.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_007_122G1_scaffold_459_21
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18969..19412)
DNA (444bp) protein (148aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DNN6_9FIRM
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDA90113.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L1_007_122G1_scaffold_459_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19429..20133)
DNA (705bp) protein (235aa)
Universal bacterial protein YeaZ n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DNZ6_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CCX81928.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
peptidase M22 family protein
L1_007_122G1_scaffold_459_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20130..20561)
DNA (432bp) protein (144aa)
Conserved hypothetical nucleotide-binding protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L869_9FIRM
conserved hypothetical nucleotide-binding protein
Conserved hypothetical nucleotide-binding protein {ECO:0000313|EMBL:CBL15814.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_007_122G1_scaffold_459_24
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20799..21494)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SH45_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EHQ61579.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
hypothetical protein
L1_007_122G1_scaffold_459_25
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21629..21814
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NB77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC09363.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L1_007_122G1_scaffold_459_26
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21831..22127
DNA (297bp) protein (99aa)
Coat F domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N2C8_9CLOT
Coat F domain protein {ECO:0000313|EMBL:EJF40914.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_007_122G1_scaffold_459_27
unknown

Not on your lists

comp(23080..23235)
DNA (156bp) protein (52aa)

This feature has no annotations

L1_007_122G1_scaffold_459_28
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23836..25062
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
tyrS; Tyrosine-tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Clostridium RepID=A7VX33_9CLOT
L1_007_122G1_scaffold_459_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25138..26130
DNA (993bp) protein (331aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISK6_9CLOT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CDB52240.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycerophosphoryl diester phosphodiesterase
L1_007_122G1_scaffold_459_30
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26193..26930)
DNA (738bp) protein (246aa)
ABC-2 type transporter n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9K1_9CLOT
ABC-2 type transporter {ECO:0000313|EMBL:EEG31911.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
ABC transporter
Displaying items 1-30 of 32 in total

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