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L1_007_122G1_scaffold_470

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_470_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUK1_BIFL1
N-acylglucosamine 2-epimerase family protein
N-acylglucosamine 2-epimerase family protein {ECO:0000313|EMBL:AHJ21307.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145..1443)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=Q8G4P0_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25138.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_007_122G1_scaffold_470_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1738..1923)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BPZ1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE89728.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
hypothetical protein
L1_007_122G1_scaffold_470_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1920..3089)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZFI6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75508.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L1_007_122G1_scaffold_470_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3261..3959)
DNA (699bp) protein (233aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=S3AGQ7_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR00131.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_470_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4034..4894)
DNA (861bp) protein (287aa)
Transporter, drug/metabolite exporter family n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y148_BIFBU
Transporter, drug/metabolite exporter family
Transporter, drug/metabolite exporter family {ECO:0000313|EMBL:ABE95814.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_470_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5204..5608
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase pdxH n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y147_BIFBU
Pyridoxamine 5'-phosphate oxidase pdxH
Pyridoxamine 5'-phosphate oxidase pdxH {ECO:0000313|EMBL:AHJ21302.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5692..6963)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2C3J5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI85039.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Methyltransferase
L1_007_122G1_scaffold_470_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7032..7877
DNA (846bp) protein (282aa)
Phosphoglycerate mutase family protein n=5 Tax=Bifidobacterium breve RepID=F9Y145_BIFBU
Phosphoglycerate mutase family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75513.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L1_007_122G1_scaffold_470_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8057..9007
DNA (951bp) protein (317aa)
CorA-like protein n=5 Tax=Bifidobacterium breve RepID=F6C956_BIFBA
Magnesium and cobalt transport protein corA
Magnesium and cobalt transport protein corA {ECO:0000313|EMBL:AHJ21299.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9020..9901
DNA (882bp) protein (294aa)
Predicted solute binding protein of ABC transporter system n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y143_BIFBU
putative solute binding protein of ABC transporter system
Putative solute binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ19472.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L1_007_122G1_scaffold_470_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9944..12907
DNA (2964bp) protein (988aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Leucine--tRNA ligase n=3 Tax=Bifidobacterium breve RepID=F9Y142_BIFBU
Leucyl-tRNA synthetase
L1_007_122G1_scaffold_470_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13392..13760
DNA (369bp) protein (123aa)
ComE operon protein 1 n=2 Tax=Bifidobacterium breve RepID=F9Y141_BIFBU
ComE operon protein 1
ComEA protein {ECO:0000313|EMBL:EFE89717.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_470_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13757..15463
DNA (1707bp) protein (569aa)
competence protein n=1 Tax=Bifidobacterium breve RepID=UPI0002E1B673
ComE operon protein 3
ComE operon protein 3 {ECO:0000313|EMBL:ABE95806.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L1_007_122G1_scaffold_470_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15542..16513
DNA (972bp) protein (324aa)
DNA polymerase III, delta subunit n=2 Tax=Bifidobacterium breve RepID=D4BPX8_BIFBR
DNA polymerase III, delta subunit
DNA polymerase III, delta subunit {ECO:0000313|EMBL:AHJ21294.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16522..17088
DNA (567bp) protein (189aa)
YjeE family ATPase n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZMB7_BIFBR
putative atpase
Putative atpase {ECO:0000313|EMBL:AHJ21293.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17145..18026
DNA (882bp) protein (294aa)
Universal bacterial protein YeaZ n=2 Tax=Bifidobacterium breve RepID=D4BPX6_BIFBR
Glycoprotease protein family
Uncharacterized protein {ECO:0000313|EMBL:BAR00119.1}; Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFE89713.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_470_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18041..18640
DNA (600bp) protein (200aa)
Ribosomal-protein-S18-alanine acetyltransferase n=2 Tax=Bifidobacterium breve RepID=F9Y0W1_BIFBU
Ribosomal-protein-S18-alanine acetyltransferase
Ribosomal-protein-S18-alanine acetyltransferase {ECO:0000313|EMBL:AHJ21291.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


18637..19680
DNA (1044bp) protein (348aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Bifidobacterium RepID=E4R2S2_BIFLM
metal-dependent protease
L1_007_122G1_scaffold_470_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19826..20053)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C5ECE4_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55688.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
vapI; plasmid maintenance system antidote protein
L1_007_122G1_scaffold_470_21
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20238..20921)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LuxR family n=3 Tax=Bifidobacterium longum RepID=B7GQR0_BIFLS
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AIZ14570.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L1_007_122G1_scaffold_470_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20914..22203)
DNA (1290bp) protein (430aa)
Histidine kinase n=3 Tax=Bifidobacterium breve RepID=F6C966_BIFBA
Two component system histidine kinase
Histidine kinase {ECO:0000313|EMBL:AEF27910.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_470_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22327..22677)
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B7GQQ8_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89708.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_470_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22680..23168)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C968_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21286.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23235..24098)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=F6C969_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26664.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L1_007_122G1_scaffold_470_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24095..24934)
DNA (840bp) protein (280aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B7GQQ5_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52135.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L1_007_122G1_scaffold_470_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24931..26025)
DNA (1095bp) protein (365aa)
ABC transporter ATP-binding component n=2 Tax=Bifidobacterium RepID=B7GQQ4_BIFLS
Bacitracin transport ATP-binding protein BcrA
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE89704.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L1_007_122G1_scaffold_470_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26183..26695)
DNA (513bp) protein (171aa)
relaxase n=1 Tax=Bifidobacterium breve RepID=UPI0002FCF46A
putative relaxase
Uncharacterized protein {ECO:0000313|EMBL:AHJ21282.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L1_007_122G1_scaffold_470_29
unknown

Not on your lists

26703..26867
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MRM7_BIFLS
hypothetical protein
Displaying 29 items

View Taxonomy