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L1_007_122G1_scaffold_471

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_471_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..2144)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=14 Tax=Firmicutes RepID=B0G6X6_9FIRM
Domain of unknown function (DUF955)./Antirestriction protein (ArdA).
Uncharacterized protein {ECO:0000313|EMBL:EHF06207.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_007_122G1_scaffold_471_2
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2357..4447)
DNA (2091bp) protein (697aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase III n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5FB68_9FIRM
L1_007_122G1_scaffold_471_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4463..4651)
DNA (189bp) protein (63aa)
Uncharacterized protein n=14 Tax=Firmicutes RepID=A8SX18_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHF06209.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_007_122G1_scaffold_471_4
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4648..5349)
DNA (702bp) protein (234aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=A8SX19_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP25454.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
L1_007_122G1_scaffold_471_5
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5342..5620)
DNA (279bp) protein (93aa)
Uncharacterized protein n=17 Tax=Firmicutes RepID=A8SX20_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE13573.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L1_007_122G1_scaffold_471_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5655..7763)
DNA (2109bp) protein (703aa)
DNA-repair protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z2P4_9CLOT
DNA-repair protein {ECO:0000313|EMBL:ENZ14292.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L1_007_122G1_scaffold_471_7
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7799..8758)
DNA (960bp) protein (320aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
DNA modification methylase (EC:2.1.1.72)
DNA methylase family protein n=2 Tax=Clostridiales RepID=J4WEP1_9FIRM
L1_007_122G1_scaffold_471_8
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8755..8964)
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=N9XGD7_9CLOT
AAA-like domain protein {ECO:0000313|EMBL:EUB14790.1}; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
putative hydrolase Tn1549-like, CTn4-Orf9
L1_007_122G1_scaffold_471_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9146..10087)
DNA (942bp) protein (314aa)
Retron-type RNA-directed DNA polymerase (EC:2.7.7.49)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I7J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETD19506.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_007_122G1_scaffold_471_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10501..11736
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Succinimonas amylolytica RepID=UPI0003637474
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCY29010.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
site-specific recombinase XerD
L1_007_122G1_scaffold_471_11
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11777..12712
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Succinimonas amylolytica RepID=UPI00036B2256
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CCY29011.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative integrase/recombinase
L1_007_122G1_scaffold_471_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12693..13703
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Succinimonas amylolytica RepID=UPI00035F388E
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:CCY29012.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
site-specific recombinase XerD
L1_007_122G1_scaffold_471_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13708..14541)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R0A733_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58153.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Retron-type reverse transcriptase
L1_007_122G1_scaffold_471_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15273..17495)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=N9XGD7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ14290.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative hydrolase Tn1549-like, CTn4-Orf9
L1_007_122G1_scaffold_471_15
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17446..17847)
DNA (402bp) protein (134aa)
Uncharacterized protein n=19 Tax=Firmicutes RepID=A8SX25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE13569.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
conjugative transposon protein
L1_007_122G1_scaffold_471_16
Acidaminococcus sp. D21, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18025..18894)
DNA (870bp) protein (290aa)
Uncharacterized protein n=16 Tax=Firmicutes RepID=A8SX27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEH90027.1}; TaxID=563191 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. D21.;"
hypothetical protein
L1_007_122G1_scaffold_471_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18914..19129)
DNA (216bp) protein (72aa)
Uncharacterized protein n=16 Tax=Firmicutes RepID=A8RSN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06219.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_007_122G1_scaffold_471_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19550..19720)
DNA (171bp) protein (57aa)
Uncharacterized protein n=29 Tax=Firmicutes RepID=A8RSN7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO31576.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_007_122G1_scaffold_471_19
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19707..21515)
DNA (1809bp) protein (603aa)
TraG/TraD family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRM7_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:EFE13548.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
putative conjugative transfer proteinTn1549-like, CTn4-Orf4
L1_007_122G1_scaffold_471_20
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21512..21988)
DNA (477bp) protein (159aa)
Uncharacterized protein n=19 Tax=Firmicutes RepID=A8SX52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE13547.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
L1_007_122G1_scaffold_471_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22030..22251)
DNA (222bp) protein (74aa)
Uncharacterized protein n=38 Tax=Bacteria RepID=H1LZ82_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD20426.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L1_007_122G1_scaffold_471_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22275..23258)
DNA (984bp) protein (328aa)
Uncharacterized protein n=15 Tax=Firmicutes RepID=A8SX55_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENZ14013.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L1_007_122G1_scaffold_471_23
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23586..25022
DNA (1437bp) protein (479aa)
TnpX site-specific recombinase family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DCS9_CLOS4
TnpX site-specific recombinase family protein {ECO:0000313|EMBL:ERJ00640.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L1_007_122G1_scaffold_471_24
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25155..25607)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKX6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49578.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
integrase/recombinase XerD
L1_007_122G1_scaffold_471_25
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25952..26194
DNA (243bp) protein (81aa)
Prevent-host-death family protein (Fragment) n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LTU5_9FIRM
Prevent-host-death protein {ECO:0000313|EMBL:EXM37619.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L1_007_122G1_scaffold_471_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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26191..26568
DNA (378bp) protein (126aa)
Death-on-curing family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P0F5_9FIRM
Death-on-curing family protein {ECO:0000313|EMBL:EDM98305.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
death-on-curing family protein
Displaying 26 items

View Taxonomy