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L1_007_122G1_scaffold_475

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_475_1
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(59..1069)
DNA (1011bp) protein (337aa)
Peptidase n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G9F8_9ACTO
Peptidase {ECO:0000313|EMBL:EGX59873.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.;"
peptidase
L1_007_122G1_scaffold_475_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1370..2425
DNA (1056bp) protein (352aa)
GroES-like protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ALT1_9CLOT
GroES-like protein {ECO:0000313|EMBL:ERI66784.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
zinc-type alcohol dehydrogenase
L1_007_122G1_scaffold_475_3
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2541..3380)
DNA (840bp) protein (280aa)
ATP-utilizing enzymes of the PP-loop superfamily n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYW2_PELTS
PP family ATPase
ATP-utilizing enzymes of the PP-loop superfamily {ECO:0000313|EMBL:BAF60809.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
L1_007_122G1_scaffold_475_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3730..4479
DNA (750bp) protein (250aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM8_9CLOT
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:EEG31146.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
MerR family transcriptional regulator
L1_007_122G1_scaffold_475_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4626..5489
DNA (864bp) protein (288aa)
EDD domain protein, DegV family n=2 Tax=Clostridium RepID=A7VTW8_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:EDO61614.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
EDD domain protein, DegV family
L1_007_122G1_scaffold_475_6
unknown

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5894..6673
DNA (780bp) protein (260aa)

This feature has no annotations

L1_007_122G1_scaffold_475_7
unknown

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6782..7258
DNA (477bp) protein (159aa)

This feature has no annotations

L1_007_122G1_scaffold_475_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7633..8499
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P408_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13226.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L1_007_122G1_scaffold_475_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8544..9464
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P408_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13226.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
endonuclease/exonuclease/phosphatase
L1_007_122G1_scaffold_475_10
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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9726..10433
DNA (708bp) protein (236aa)
Transcriptional regulator XRE family n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6K1_9FIRM
XRE family transcriptional regulator {ECO:0000313|EMBL:EGQ72694.1}; Flags: Fragment;; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0400.;"
hypothetical protein
L1_007_122G1_scaffold_475_11
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10366..11472)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L2G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67242.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
putative phosphohydrolase
L1_007_122G1_scaffold_475_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11654..12838
DNA (1185bp) protein (395aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Phosphopentomutase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N825_9CLOT
hypothetical protein
L1_007_122G1_scaffold_475_13
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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12884..13279
DNA (396bp) protein (132aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase id=3610042 bin=GWF2_Clostridiales_36_10 species=Clostridium citroniae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L1_007_122G1_scaffold_475_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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13326..14003
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42602.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_007_122G1_scaffold_475_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14055..15212
DNA (1158bp) protein (386aa)
Amidohydrolase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I012_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDB42635.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
amidohydrolase
L1_007_122G1_scaffold_475_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15209..16150
DNA (942bp) protein (314aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Fumarate hydratase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXJ6_9FIRM
Fumarate hydratase {ECO:0000313|EMBL:CCY90041.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L1_007_122G1_scaffold_475_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16224..16811
DNA (588bp) protein (196aa)
Ribosomal subunit interface protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXL4_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDB42633.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_475_18
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16990..18120
DNA (1131bp) protein (377aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.52)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EN56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91422.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L1_007_122G1_scaffold_475_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18341..19285
DNA (945bp) protein (315aa)
Lipid kinase YegS/Rv2252/BmrU family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IB39_9FIRM
Lipid kinase YegS/Rv2252/BmrU family {ECO:0000313|EMBL:CDB42631.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_475_20
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19545..20828)
DNA (1284bp) protein (428aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:ETA81667.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ETA81667.1};; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
O-acetylhomoserine (thiol)-lyase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B6A4F4
L1_007_122G1_scaffold_475_21
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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21455..21814
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KIV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43427.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L1_007_122G1_scaffold_475_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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21988..22782
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47663.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
TM2 domain.
L1_007_122G1_scaffold_475_23

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comp(22859..23419)
DNA (561bp) protein (187aa)
PF14277 domain protein n=2 Tax=root RepID=R5N313_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKC44768.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_007_122G1_scaffold_475_24
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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23631..25106
DNA (1476bp) protein (492aa)
Uracil permease n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TA14_9STAP
Uracil permease {ECO:0000313|EMBL:CDC70263.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
pyrP; Uracil permease
L1_007_122G1_scaffold_475_25

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comp(25458..26186)
DNA (729bp) protein (243aa)
Metallophosphoesterase n=1 Tax=human gut metagenome RepID=K1U0A3_9ZZZZ
Metallophosphoesterase {ECO:0000313|EMBL:EKC64946.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying 25 items

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