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L1_007_122G1_scaffold_490

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_490_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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424..1884
DNA (1461bp) protein (487aa)
PRTRC system protein A n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRB1_9FIRM
PRTRC system protein A {ECO:0000313|EMBL:EHL72461.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_490_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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1881..2642
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YBW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13062.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
UBA/THIF-type NAD/FAD binding protein
L1_007_122G1_scaffold_490_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2639..3280
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72459.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_490_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3277..4674
DNA (1398bp) protein (466aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72458.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_490_5
unknown

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4694..4990
DNA (297bp) protein (99aa)

This feature has no annotations

L1_007_122G1_scaffold_490_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5000..5596
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72456.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_490_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5599..6264
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72455.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_490_8
unknown

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6279..6467
DNA (189bp) protein (63aa)

This feature has no annotations

L1_007_122G1_scaffold_490_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6482..7291
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72454.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Rad52/22 double-strand break repair protein
L1_007_122G1_scaffold_490_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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7307..9163
DNA (1857bp) protein (619aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38994.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ATPase involved in DNA repair
L1_007_122G1_scaffold_490_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9160..10257
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72452.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DnaG2; DNA primase
L1_007_122G1_scaffold_490_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10275..11240
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF38992.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_490_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11253..11588
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72450.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_490_14
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11620..11994
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39004.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L1_007_122G1_scaffold_490_15
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12377..12679
DNA (303bp) protein (101aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFR0_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG29689.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Helix-turn-helix.
L1_007_122G1_scaffold_490_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12995..13492
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72393.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_490_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13704..15314
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M975_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64407.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
site-specific recombinase XerC
L1_007_122G1_scaffold_490_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15659..16168)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75685.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_490_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16663..17382)
DNA (720bp) protein (240aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN69_9FIRM
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EHL75687.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
pyridoxal phosphate enzyme, YggS family
L1_007_122G1_scaffold_490_20
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17383..17949)
DNA (567bp) protein (189aa)
UPF0340 protein HMPREF1032_01689 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN70_9FIRM
UPF0340 protein HMPREF1032_01689 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
conserved hypothetical protein TIGR01440
L1_007_122G1_scaffold_490_21
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18304..19278
DNA (975bp) protein (325aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN71_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHL75689.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
diguanylate cyclase (GGDEF) domain
L1_007_122G1_scaffold_490_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19453..24684
DNA (5232bp) protein (1744aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RN73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL75691.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
Displaying 22 items

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