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L1_007_122G1_scaffold_493

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_493_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..977
DNA (975bp) protein (325aa)
Hexuronate transporter n=3 Tax=Escherichia coli RepID=N2RS15_ECOLX
d-galactonate transporter
Hexuronate transporter {ECO:0000313|EMBL:EMW17283.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L1_007_122G1_scaffold_493_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1107..1883
DNA (777bp) protein (259aa)
Exu regulon transcriptional regulator n=799 Tax=Enterobacteriaceae RepID=EXUR_ECO57
DNA-binding transcriptional repressor ExuR
FCD domain protein {ECO:0000313|EMBL:EII20878.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L1_007_122G1_scaffold_493_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2228..2890
DNA (663bp) protein (221aa)
Inner membrane protein YqjA n=1630 Tax=Enterobacteriaceae RepID=YQJA_ECO57
hypothetical protein
Inner membrane protein YqjA {ECO:0000313|EMBL:EOV70760.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L1_007_122G1_scaffold_493_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2894..3277
DNA (384bp) protein (128aa)
Modulator protein MzrA n=334 Tax=Enterobacteriaceae RepID=C3STL2_ECOLX
hypothetical protein
Modulator protein MzrA {ECO:0000256|HAMAP-Rule:MF_00904}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
L1_007_122G1_scaffold_493_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3424..3792
DNA (369bp) protein (123aa)
Protein YqjC n=573 Tax=Escherichia RepID=YQJC_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK13635.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
L1_007_122G1_scaffold_493_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3830..4135
DNA (306bp) protein (102aa)
Uncharacterized protein YqjD n=1358 Tax=Enterobacteriaceae RepID=YQJD_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKJ13142.1}; TaxID=1005550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli EC1865.;"
L1_007_122G1_scaffold_493_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4138..4542
DNA (405bp) protein (135aa)
Inner membrane protein YqjE n=4 Tax=Escherichia coli RepID=F4SNA1_ECOLX
yqjE; hypothetical protein
Inner membrane protein yqjE {ECO:0000313|EMBL:EQZ98178.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L1_007_122G1_scaffold_493_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4532..4831
DNA (300bp) protein (100aa)
Uncharacterized protein n=1012 Tax=Enterobacteriaceae RepID=C3STJ2_ECOLX
cell division MukB-like protein
YqjK-like family protein {ECO:0000313|EMBL:END51387.1}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L1_007_122G1_scaffold_493_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4927..5409
DNA (483bp) protein (161aa)
Inner membrane protein yqjF n=1 Tax=Escherichia coli E101 RepID=H1E3Y3_ECOLX
yqjF; putative quinol oxidase subunit
Inner membrane protein yqjF {ECO:0000313|EMBL:EQO58664.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 (4-2677849).;"
L1_007_122G1_scaffold_493_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5479..6465
DNA (987bp) protein (329aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=D7XZ49_ECOLX
Transferase {ECO:0000313|EMBL:EOV55048.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
yqjG; S-transferase
L1_007_122G1_scaffold_493_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6758..7123
DNA (366bp) protein (122aa)
Inner membrane protein YhaH n=976 Tax=Enterobacteriaceae RepID=YHAH_ECO57
yhaH; putative inner membrane protein
Inner membrane protein YhaH {ECO:0000313|EMBL:EGI20164.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L1_007_122G1_scaffold_493_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7365..7721
DNA (357bp) protein (119aa)
Inner membrane protein YhaI n=469 Tax=Enterobacteriaceae RepID=YHAI_ECO57
hypothetical protein
Inner membrane protein yhaI {ECO:0000313|EMBL:EZK20127.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L1_007_122G1_scaffold_493_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7772..8668)
DNA (897bp) protein (299aa)
Uncharacterized HTH-type transcriptional regulator YhaJ n=439 Tax=Escherichia RepID=YHAJ_ECO57
yhaJ; LysR family transcriptional regulator
LysR-family transcriptional regulator YhaJ {ECO:0000313|EMBL:CDK80742.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
L1_007_122G1_scaffold_493_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8773..9474
DNA (702bp) protein (234aa)
Pirin-like protein YhaK n=133 Tax=Escherichia RepID=YHAK_ECOLI
hypothetical protein
Pirin superfamily {ECO:0000313|EMBL:EGI20168.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L1_007_122G1_scaffold_493_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9497..9661
DNA (165bp) protein (55aa)
Uncharacterized protein n=76 Tax=Escherichia coli RepID=B2NBG5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKE87471.1}; TaxID=1048254 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. C227-11.;"
L1_007_122G1_scaffold_493_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9722..11032)
DNA (1311bp) protein (437aa)
UPF0597 protein YhaM n=77 Tax=Escherichia coli RepID=YHAM_ECO7I
hypothetical protein
UPF0597 protein YhaM {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C1.;"
L1_007_122G1_scaffold_493_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11060..12391)
DNA (1332bp) protein (444aa)
Inner membrane transport protein YhaO n=500 Tax=Enterobacteriaceae RepID=YHAO_ECOLI
transporter
Inner membrane transport protein YhaO {ECO:0000313|EMBL:KDU32622.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L1_007_122G1_scaffold_493_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12667..14031)
DNA (1365bp) protein (455aa)
L-serine dehydratase TdcG n=181 Tax=Escherichia RepID=TDCG_ECOLI
tdcG; L-serine dehydratase 1
L-serine ammonia-lyase {ECO:0000313|EMBL:ESA87399.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L1_007_122G1_scaffold_493_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14103..14492)
DNA (390bp) protein (130aa)
TdcF protein n=4 Tax=Escherichia coli RepID=D3QS56_ECOCB
hypothetical protein
Protein tdcF {ECO:0000313|EMBL:END88951.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L1_007_122G1_scaffold_493_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14506..16800)
DNA (2295bp) protein (765aa)
formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=51 Tax=Escherichia coli RepID=B1IRK1_ECOLC
Keto-acid formate acetyltransferase {ECO:0000313|EMBL:EOU64115.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L1_007_122G1_scaffold_493_21
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16834..18042)
DNA (1209bp) protein (403aa)
Propionate kinase {ECO:0000256|HAMAP-Rule:MF_01881}; EC=2.7.2.15 {ECO:0000256|HAMAP-Rule:MF_01881};; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei str. Moseley.;"
Propionate kinase n=130 Tax=Enterobacteriaceae RepID=B7LH47_ECO55
propionate/acetate kinase
L1_007_122G1_scaffold_493_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18068..19399)
DNA (1332bp) protein (444aa)
Threonine/serine transporter TdcC n=178 Tax=Enterobacteriaceae RepID=TDCC_ECOLC
threonine/serine transporter TdcC
Threonine/serine transporter TdcC {ECO:0000256|HAMAP-Rule:MF_01583}; H(+)/threonine-serine symporter {ECO:0000256|HAMAP-Rule:MF_01583}; TaxID=1268989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907889.;"
L1_007_122G1_scaffold_493_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19421..20410)
DNA (990bp) protein (330aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFK20446.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFK20446.1};; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L-threonine dehydratase catabolic TdcB n=1302 Tax=Enterobacteriaceae RepID=TDCB_ECO57
threonine deaminase
L1_007_122G1_scaffold_493_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20509..21447)
DNA (939bp) protein (313aa)
LysR substrate binding domain protein n=3 Tax=Escherichia coli RepID=D7XZ34_ECOLX
HTH-type transcriptional regulator tdcA {ECO:0000313|EMBL:EOV55063.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
LysR family transcriptional regulator
L1_007_122G1_scaffold_493_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22236..22784
DNA (549bp) protein (183aa)
Uncharacterized protein YhaB n=217 Tax=Escherichia RepID=YHAB_ECOLI
yhaB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW11431.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L1_007_122G1_scaffold_493_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22796..23899
DNA (1104bp) protein (368aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=K3JCG1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW03387.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
L1_007_122G1_scaffold_493_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24811..25956)
DNA (1146bp) protein (382aa)
garK; glycerate kinase (EC:2.7.1.-)
Glycerate 2-kinase n=194 Tax=Escherichia RepID=GLXK1_ECOLI
Glycerate kinase 2 {ECO:0000313|EMBL:EGI09515.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L1_007_122G1_scaffold_493_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26053..26943)
DNA (891bp) protein (297aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Escherichia coli KTE119 RepID=L3UDN5_ECOLX
Tartronate semialdehyde reductase {ECO:0000313|EMBL:AIF63616.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L1_007_122G1_scaffold_493_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26973..27743)
DNA (771bp) protein (257aa)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000256|HAMAP-Rule:MF_01291};; 2-dehydro-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 2-keto-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 5-dehydro-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Alpha-keto-beta-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
alpha-dehydro-beta-deoxy-D-glucarate aldolase (EC:4.1.2.20)
5-keto-4-deoxy-D-glucarate aldolase n=4 Tax=Escherichia coli RepID=D7XZ26_ECOLX
L1_007_122G1_scaffold_493_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27759..29093)
DNA (1335bp) protein (445aa)
Probable galactarate transporter n=660 Tax=Enterobacteriaceae RepID=GARP_ECO57
galactarate transporter
D-galactonate transporter family protein {ECO:0000313|EMBL:EHW13097.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Displaying items 1-30 of 47 in total

View Taxonomy