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L1_007_122G1_scaffold_526

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_526_1
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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376..1506
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IW66_9FIRM
L1_007_122G1_scaffold_526_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1561..3141)
DNA (1581bp) protein (527aa)
Putative stage V sporulation protein B n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYA0_9FIRM
Putative stage V sporulation protein B {ECO:0000313|EMBL:CDB41990.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
polysaccharide biosynthesis protein
L1_007_122G1_scaffold_526_3
unknown

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3264..3452
DNA (189bp) protein (63aa)

This feature has no annotations

L1_007_122G1_scaffold_526_4
unknown

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3534..3806
DNA (273bp) protein (91aa)

This feature has no annotations

L1_007_122G1_scaffold_526_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3978..5885
DNA (1908bp) protein (636aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67471.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
alpha amylase
L1_007_122G1_scaffold_526_6
unknown

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5904..6392
DNA (489bp) protein (163aa)

This feature has no annotations

L1_007_122G1_scaffold_526_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6423..7964
DNA (1542bp) protein (514aa)
Transporter major facilitator family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUB9_9FIRM
Transporter major facilitator family {ECO:0000313|EMBL:CDB41463.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Oligogalacturonide transporter
L1_007_122G1_scaffold_526_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7961..8389
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DVP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA92528.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L1_007_122G1_scaffold_526_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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8423..9184
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32850.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
4Fe-4S ferredoxin
L1_007_122G1_scaffold_526_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9282..9911
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
upp; Uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MZX9_9FIRM
L1_007_122G1_scaffold_526_11
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10055..10702
DNA (648bp) protein (216aa)
Pentapeptide repeat protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GM25_9FIRM
Pentapeptide repeat protein {ECO:0000313|EMBL:CDE28449.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L1_007_122G1_scaffold_526_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10718..10942
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SA06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP21882.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Protein of unknown function (DUF1653).
L1_007_122G1_scaffold_526_13
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10939..11292
DNA (354bp) protein (118aa)
ArsC family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ATW6_9CLOT
ArsC family protein {ECO:0000313|EMBL:ERI69274.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
arsenate reductase-like protein
L1_007_122G1_scaffold_526_14
unknown

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comp(11414..13846)
DNA (2433bp) protein (811aa)

This feature has no annotations

L1_007_122G1_scaffold_526_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13983..17366
DNA (3384bp) protein (1128aa)
Isoleucine--tRNA ligase {ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|SAAS:SAAS00106059};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Isoleucyl-tRNA synthetase n=2 Tax=root RepID=R5MFR6_9FIRM
isoleucyl-tRNA synthetase
L1_007_122G1_scaffold_526_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17487..18575)
DNA (1089bp) protein (363aa)
KamA family protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YR38_9CLOT
KamA family protein {ECO:0000313|EMBL:ENZ14503.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L-lysine 2,3-aminomutase
L1_007_122G1_scaffold_526_17
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19102..19239
DNA (138bp) protein (46aa)
RSAM-modified six-cysteine peptide n=1 Tax=Clostridium sp. CAG:557 RepID=R6GIE7_9CLOT
RSAM-modified six-cysteine peptide {ECO:0000313|EMBL:CDB24200.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
hypothetical protein
L1_007_122G1_scaffold_526_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19345..20724
DNA (1380bp) protein (460aa)
SCIFF radical SAM maturase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7I7_9FIRM
SCIFF radical SAM maturase {ECO:0000313|EMBL:CDB42454.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
radical SAM protein
L1_007_122G1_scaffold_526_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20881..21528
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42392.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_526_20
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21519..22508)
DNA (990bp) protein (330aa)
Tyrosine recombinase XerC 1 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N4T4_9FIRM
Tyrosine recombinase XerC 1 {ECO:0000313|EMBL:CCY92576.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
integrase family protein
Displaying 20 items

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