ggKbase home page

L1_007_122G1_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_529_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54..731)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JIK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61105.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
AraC-type DNA-binding domain-containing proteins
L1_007_122G1_scaffold_529_2
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

929..2401
DNA (1473bp) protein (491aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JQV5_9CLOT
glycoside hydrolase family 2 protein
L1_007_122G1_scaffold_529_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2415..3101
DNA (687bp) protein (229aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=2 Tax=Clostridium RepID=N9XSF9_9CLOT
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:ENZ18296.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_007_122G1_scaffold_529_4
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3334..3495
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JYZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64069.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
transcriptional regulator, AraC family
L1_007_122G1_scaffold_529_5
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3477..4166
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JYZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64069.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
transcriptional regulator, AraC family
L1_007_122G1_scaffold_529_6
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5568..7292)
DNA (1725bp) protein (575aa)
xenobiotic ABC transporter ATPase (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0MG28_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR97048.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L1_007_122G1_scaffold_529_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7293..9047)
DNA (1755bp) protein (585aa)
xenobiotic ABC transporter ATPase (EC:3.6.3.44)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RNI4_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ42026.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L1_007_122G1_scaffold_529_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9174..9791
DNA (618bp) protein (206aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RNI3_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:ENZ42025.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
transcriptional regulator
L1_007_122G1_scaffold_529_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9870..10457
DNA (588bp) protein (196aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RNI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ42024.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L1_007_122G1_scaffold_529_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10457..11182
DNA (726bp) protein (242aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RNI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17630.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L1_007_122G1_scaffold_529_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11196..12695
DNA (1500bp) protein (500aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RNI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17629.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC transporter ATP-binding protein
L1_007_122G1_scaffold_529_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13139..13750
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0MG22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR97042.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
membrane protein
L1_007_122G1_scaffold_529_13
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13747..14448
DNA (702bp) protein (234aa)
Cobalt transport protein n=2 Tax=Clostridiales RepID=B0MG21_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EDR97041.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
cobalt transport protein
L1_007_122G1_scaffold_529_14
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14668..15621
DNA (954bp) protein (318aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=B0MG12_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDR97032.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
transcriptional regulator, AraC family
L1_007_122G1_scaffold_529_15
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15642..17105
DNA (1464bp) protein (488aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0MG11_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR97031.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
ABC transporter-like protein
L1_007_122G1_scaffold_529_16
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17261..19081
DNA (1821bp) protein (607aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0MG10_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR97030.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_122G1_scaffold_529_17
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19086..20819
DNA (1734bp) protein (578aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0MG09_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDR97029.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
ABC-type multidrug transport system, ATPase and permease components
L1_007_122G1_scaffold_529_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21927..22337
DNA (411bp) protein (137aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Clostridium bolteae RepID=N9ZP48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17521.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L1_007_122G1_scaffold_529_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23419..24234
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XRI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98191.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L1_007_122G1_scaffold_529_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25376..25720
DNA (345bp) protein (115aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
mRNA interferase n=4 Tax=Clostridium bolteae RepID=R0B9A4_9CLOT
transcriptional modulator of MazE/toxin MazF
L1_007_122G1_scaffold_529_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25823..26221
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RN42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17516.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
putative recombinase
L1_007_122G1_scaffold_529_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26235..26399
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZU05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74839.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_007_122G1_scaffold_529_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26474..28084
DNA (1611bp) protein (537aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RN39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17514.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
site-specific DNA recombinase
L1_007_122G1_scaffold_529_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28084..29070
DNA (987bp) protein (329aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9WEE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ62499.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
recombinase
L1_007_122G1_scaffold_529_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29252..30655
DNA (1404bp) protein (468aa)
Site-specific recombinase n=1 Tax=Clostridium bolteae 90B8 RepID=R0B3J6_9CLOT
Site-specific recombinase {ECO:0000313|EMBL:ENZ43248.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
DNA recombinase, putative
L1_007_122G1_scaffold_529_26
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31282..31995
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K4T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38497.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_007_122G1_scaffold_529_27
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31999..32442
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QLL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22857.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_122G1_scaffold_529_28
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32435..32863
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NHI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC07834.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein predicted by Glimmer/Critica
L1_007_122G1_scaffold_529_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32959..33525
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8CDU0_9FIRM
Transposase {ECO:0000313|EMBL:EDY33465.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Transposase.
L1_007_122G1_scaffold_529_30
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33790..34230
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BG90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ74843.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
Displaying items 1-30 of 41 in total

View Taxonomy