ggKbase home page

L1_007_122G1_scaffold_535

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_535_1
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(329..1756)
DNA (1428bp) protein (476aa)
glutamate--ammonia ligase (EC:6.3.1.2)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5TYR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61982.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_535_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2028..2780)
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5TSL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61981.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
aminoglycoside phosphotransferase
L1_007_122G1_scaffold_535_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2884..3543)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95647.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_535_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3530..3811)
DNA (282bp) protein (94aa)
Transcriptional regulator, ArsR family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARA7_9CLOT
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EFC95648.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ArsR family transcriptional regulator
L1_007_122G1_scaffold_535_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3942..5231)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95649.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Suppressor of fused protein (SUFU).
L1_007_122G1_scaffold_535_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5339..5770)
DNA (432bp) protein (144aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARA9_9CLOT
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EFC95650.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
SUF system FeS assembly protein, NifU family
L1_007_122G1_scaffold_535_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5760..6980)
DNA (1221bp) protein (407aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=2 Tax=Clostridium RepID=R5TSK7_9CLOT
L1_007_122G1_scaffold_535_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6955..8034)
DNA (1080bp) protein (360aa)
SufB/sufD domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARB2_9CLOT
SufB/sufD domain protein {ECO:0000313|EMBL:EFC95644.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L1_007_122G1_scaffold_535_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8070..9476)
DNA (1407bp) protein (469aa)
FeS assembly protein SufB n=2 Tax=Clostridium RepID=R5TFE9_9CLOT
FeS assembly protein SufB {ECO:0000313|EMBL:CCZ61974.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Iron-regulated ABC transporter membrane component SufB
L1_007_122G1_scaffold_535_10
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9507..10262)
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T8L2_9CLOT
FeS assembly ATPase SufC {ECO:0000313|EMBL:CCZ61973.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Iron-regulated ABC transporter ATPase subunit SufC
L1_007_122G1_scaffold_535_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10473..10892
DNA (420bp) protein (140aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridium RepID=D3ARB7_9CLOT
Iron-sulfur cluster assembly transcription factor IscR {ECO:0000313|EMBL:CCZ61972.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
transcriptional regulator, BadM/Rrf2 family
L1_007_122G1_scaffold_535_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11033..13300
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TSK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61971.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
putative signaling protein
L1_007_122G1_scaffold_535_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13427..14530)
DNA (1104bp) protein (368aa)
PTS system fructose-specific transporter subunit IIBC (EC:2.7.1.69)
Phosphotransferase system, EIIC (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR15_9CLOT
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EFC95745.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_535_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14544..15227)
DNA (684bp) protein (228aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Putative ribulose-phosphate 3-epimerase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR14_9CLOT
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EFC95744.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_007_122G1_scaffold_535_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15244..15765)
DNA (522bp) protein (174aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR13_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFC95743.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
PTS system transporter subunit IIA
L1_007_122G1_scaffold_535_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15779..16096)
DNA (318bp) protein (106aa)
PTS system, Fru family, IIB component {ECO:0000313|EMBL:EFC95742.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFC95742.1};; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
frwB_2; fructose-like phosphotransferase enzyme IIB component 2 (EC:2.7.1.69)
PTS system, Fru family, IIB component n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR12_9CLOT
L1_007_122G1_scaffold_535_17
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16286..17725)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NPA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR33565.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
L1_007_122G1_scaffold_535_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17741..19828)
DNA (2088bp) protein (696aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR09_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFC95749.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Ascorbate-specific PTS system, EIIA component
L1_007_122G1_scaffold_535_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19833..20120)
DNA (288bp) protein (96aa)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AR08_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFC95748.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L1_007_122G1_scaffold_535_20
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20242..22059)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61970.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycerophosphoryl diester phosphodiesterase
Displaying 20 items

View Taxonomy