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L1_007_122G1_scaffold_550

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_550_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..82
DNA (81bp) protein (27aa)
Integrase core domain protein (Fragment) n=1 Tax=Escherichia coli P0304816.2 RepID=N4BU24_ECOLX
hypothetical protein
Transposase {ECO:0000313|EMBL:AJB52133.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L1_007_122G1_scaffold_550_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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223..1422
DNA (1200bp) protein (400aa)
Transporter, major facilitator family protein n=16 Tax=Escherichia coli RepID=E9TDN1_ECOLX
MFS transporter {ECO:0000313|EMBL:KIG56409.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
major facilitator superfamily protein
L1_007_122G1_scaffold_550_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1434..2126
DNA (693bp) protein (231aa)
ChaC protein n=2 Tax=Escherichia coli RepID=E9WE50_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV63443.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
ChaC family protein
L1_007_122G1_scaffold_550_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2123..3004
DNA (882bp) protein (294aa)
LysR substrate binding domain protein n=15 Tax=Escherichia coli RepID=D8E4L2_ECOLX
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGI47141.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
transcriptional regulator, LysR family
L1_007_122G1_scaffold_550_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3135..4412)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE64 RepID=S1DBS9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV63441.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
L1_007_122G1_scaffold_550_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4476..6473)
DNA (1998bp) protein (666aa)
Transporter, betaine/carnitine/choline family n=30 Tax=Escherichia coli RepID=D8E4L0_ECOLX
Transporter, betaine/carnitine/choline transporter family protein {ECO:0000313|EMBL:EMW21264.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
betaine-carnitine-choline transporter family member BetU
L1_007_122G1_scaffold_550_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6814..7236)
DNA (423bp) protein (141aa)
Phage protein n=1 Tax=Escherichia coli KTE64 RepID=S1DBH9_ECOLX
Phage protein {ECO:0000313|EMBL:EOV63439.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
hypothetical protein
L1_007_122G1_scaffold_550_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7252..8013)
DNA (762bp) protein (254aa)
Uncharacterized protein n=9 Tax=Escherichia coli RepID=H9Y0Y9_ECOLW
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI22748.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L1_007_122G1_scaffold_550_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8036..8782)
DNA (747bp) protein (249aa)
Phage DNA replication protein n=1 Tax=Escherichia coli KTE64 RepID=S1DMX4_ECOLX
Phage DNA replication protein {ECO:0000313|EMBL:EOV63437.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
putative phage DNA replication protein
L1_007_122G1_scaffold_550_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8789..9577)
DNA (789bp) protein (263aa)
Uncharacterized protein n=11 Tax=Escherichia coli RepID=I0VN57_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KEN99930.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
hypothetical protein
L1_007_122G1_scaffold_550_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9655..10077)
DNA (423bp) protein (141aa)
Uncharacterized protein n=92 Tax=Escherichia coli RepID=B7A351_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA70956.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
L1_007_122G1_scaffold_550_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10074..10328)
DNA (255bp) protein (85aa)
Regulatory protein n=121 Tax=Escherichia coli RepID=B7A352_ECO57
putative transcriptional regulator
Putative 8.4 kDa cro protein {ECO:0000313|EMBL:ENB14160.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
L1_007_122G1_scaffold_550_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10408..10827
DNA (420bp) protein (140aa)
Helix-turn-helix domain protein n=119 Tax=Escherichia coli RepID=E0IUQ2_ECOLW
putative phage repressor protein CI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ESA70958.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
L1_007_122G1_scaffold_550_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11260..11415
DNA (156bp) protein (52aa)
Uncharacterized protein YdaF n=155 Tax=Enterobacteriaceae RepID=YDAF_ECO57
ydaF; Rac prophage; predicted protein
Phage protein {ECO:0000313|EMBL:EQX90079.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
L1_007_122G1_scaffold_550_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11412..12023)
DNA (612bp) protein (204aa)
Phage superinfection exclusion protein n=1 Tax=Escherichia coli UMEA 3150-1 RepID=U0D511_ECOLX
hypothetical protein
Phage superinfection exclusion protein {ECO:0000313|EMBL:EQZ93760.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L1_007_122G1_scaffold_550_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12342..12563
DNA (222bp) protein (74aa)
Uncharacterized protein n=178 Tax=Enterobacteriaceae RepID=Q8X8R3_ECO57
kil; FtsZ inhibitor protein
Protein kil {ECO:0000313|EMBL:EQY75856.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L1_007_122G1_scaffold_550_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12563..12733
DNA (171bp) protein (57aa)
Uncharacterized protein YdaE n=219 Tax=Enterobacteriaceae RepID=YDAE_ECOLI
putative bacteriophage protein
Phage protein {ECO:0000313|EMBL:EOV63428.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L1_007_122G1_scaffold_550_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12808..13083
DNA (276bp) protein (92aa)
Protein RacC n=135 Tax=Enterobacteriaceae RepID=RACC_ECOLI
hypothetical protein
Protein RacC {ECO:0000313|EMBL:EGU95748.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L1_007_122G1_scaffold_550_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13185..15785
DNA (2601bp) protein (867aa)
Exodeoxyribonuclease 8 n=3 Tax=Escherichia coli RepID=L3ICE1_ECOLX
Exodeoxyribonuclease 8 {ECO:0000313|EMBL:EOW08289.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
recE; exonuclease VIII
L1_007_122G1_scaffold_550_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15778..16587
DNA (810bp) protein (270aa)
Protein RecT n=136 Tax=Enterobacteriaceae RepID=RECT_ECOLI
RecT protein
Protein recT {ECO:0000313|EMBL:ESK37570.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L1_007_122G1_scaffold_550_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16605..16838
DNA (234bp) protein (78aa)
Restriction alleviation and modification protein n=1 Tax=Escherichia coli 113290 RepID=U9YC29_ECOLX
restriction alleviation protein, Lar family
Restriction alleviation protein, Lar family {ECO:0000313|EMBL:ADX51103.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
L1_007_122G1_scaffold_550_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16831..17040
DNA (210bp) protein (70aa)
Double-strand break reduction protein n=243 Tax=Enterobacteriaceae RepID=RCBA_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOU70114.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L1_007_122G1_scaffold_550_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17119..17334
DNA (216bp) protein (72aa)
Uncharacterized protein YdaQ n=360 Tax=Enterobacteriaceae RepID=YDAQ_ECOLI
hypothetical protein
Phage excisionase {ECO:0000313|EMBL:EQZ93753.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L1_007_122G1_scaffold_550_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17336..18571
DNA (1236bp) protein (412aa)
Putative lambdoid prophage Rac integrase n=88 Tax=Escherichia coli RepID=INTR_ECOLI
intR; Rac prophage; integrase
Putative lambdoid prophage Rac integrase {ECO:0000313|EMBL:EFK48998.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L1_007_122G1_scaffold_550_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18623..19558
DNA (936bp) protein (312aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=193 Tax=Enterobacteriaceae RepID=TTCA_ECO57
ydaO; C32 tRNA thiolase
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L1_007_122G1_scaffold_550_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19687..21060)
DNA (1374bp) protein (458aa)
ATP-dependent RNA helicase DbpA {ECO:0000256|HAMAP-Rule:MF_00965}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00965};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
ATP-dependent RNA helicase DbpA n=149 Tax=Escherichia coli RepID=A7ZLH3_ECO24
dbpA; ATP-dependent RNA helicase, specific for 23S rRNA
L1_007_122G1_scaffold_550_27
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21090..21263)
DNA (174bp) protein (58aa)
Uncharacterized protein n=609 Tax=Escherichia RepID=J7R0K2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELC19104.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
L1_007_122G1_scaffold_550_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21479..22462)
DNA (984bp) protein (328aa)
Zinc transport protein ZntB n=1222 Tax=Enterobacteriaceae RepID=ZNTB_ECO24
zntB; zinc transport protein ZntB
Zinc transport protein ZntB {ECO:0000256|HAMAP-Rule:MF_01565, ECO:0000256|SAAS:SAAS00010762}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L1_007_122G1_scaffold_550_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22717..23949
DNA (1233bp) protein (411aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=3 Tax=Escherichia coli RepID=L3IAR4_ECOLX
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EOW08280.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
L1_007_122G1_scaffold_550_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23970..24533)
DNA (564bp) protein (188aa)
Probable DNA endonuclease SmrA n=204 Tax=Enterobacteriaceae RepID=SMRA_ECOLI
hypothetical protein
Putative Smr domain protein {ECO:0000313|EMBL:EGI10925.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
Displaying 30 items

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