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L1_007_122G1_scaffold_568

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_568_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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816..1742
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUP6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96815.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_007_122G1_scaffold_568_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1908..2714
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HX41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41575.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
beta-lactamase domain-containing protein
L1_007_122G1_scaffold_568_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3146..4165
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=root RepID=R5MLL8_9FIRM
phenylalanyl-tRNA synthetase subunit alpha
L1_007_122G1_scaffold_568_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4306..6687
DNA (2382bp) protein (794aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Phenylalanine--tRNA ligase beta subunit n=4 Tax=root RepID=R5N461_9FIRM
phenylalanyl-tRNA synthetase subunit beta
L1_007_122G1_scaffold_568_5
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(6815..7234)
DNA (420bp) protein (140aa)
Integrase core domain protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LH34_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EFY03909.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Transposase and inactivated derivatives
L1_007_122G1_scaffold_568_6
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7490..8278
DNA (789bp) protein (263aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LBS3_9FIRM
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:EET61876.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative DNA-binding protein
L1_007_122G1_scaffold_568_7
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8389..8973)
DNA (585bp) protein (195aa)
Galactoside O-acetyltransferase (EC:2.3.1.18)
Galactoside O-acetyltransferase n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESB2_9FIRM
Galactoside O-acetyltransferase {ECO:0000313|EMBL:CDE05530.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L1_007_122G1_scaffold_568_8
unknown

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comp(8933..9157)
DNA (225bp) protein (75aa)

This feature has no annotations

L1_007_122G1_scaffold_568_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9334..10086
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MHD7_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
30S ribosomal protein S2
L1_007_122G1_scaffold_568_10
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10230..11159
DNA (930bp) protein (310aa)
Elongation factor Ts n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N1R7_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
translation elongation factor Ts (EF-Ts)
L1_007_122G1_scaffold_568_11
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(11277..13004)
DNA (1728bp) protein (576aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000313|EMBL:ACT00441.1}; EC=3.2.1.23 {ECO:0000313|EMBL:ACT00441.1};; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
beta-galactosidase n=1 Tax=Paenibacillus ginsengihumi RepID=UPI000375DC52
L1_007_122G1_scaffold_568_12
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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13278..15047
DNA (1770bp) protein (590aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QPA1_9FIRM
1-deoxy-D-xylulose-5-phosphate synthase
L1_007_122G1_scaffold_568_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15415..16671)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BMG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62114.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
oxidoreductase domain-containing protein
L1_007_122G1_scaffold_568_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17319..19070
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41435.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
glycoside hydrolase 2 sugar binding protein
L1_007_122G1_scaffold_568_15
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19185..20186
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6Q9Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC32510.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
Displaying 15 items

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