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L1_007_122G1_scaffold_578

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_578_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..487
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72955.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
m23 peptidase domain protein
L1_007_122G1_scaffold_578_2
unknown

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comp(508..1626)
DNA (1119bp) protein (373aa)

This feature has no annotations

L1_007_122G1_scaffold_578_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1666..2022)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00035CA99D
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ14488.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
L1_007_122G1_scaffold_578_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2093..2476)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72398.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_578_5
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2730..3857)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL18657.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
ICESt1 ORFD ATP/GTP-binding protein
L1_007_122G1_scaffold_578_6
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3850..4668)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL18658.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
hypothetical protein
L1_007_122G1_scaffold_578_7
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4861..5427)
DNA (567bp) protein (189aa)
Uncharacterized protein n=7 Tax=Clostridium thermocellum RepID=E6ULT3_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN54420.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_007_122G1_scaffold_578_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5396..6775)
DNA (1380bp) protein (460aa)
RHS repeat-associated core domain-containing protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR49_9FIRM
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:EHL72399.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L1_007_122G1_scaffold_578_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6857..7168)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72398.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L1_007_122G1_scaffold_578_10
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7268..7786)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I3A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA80730.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
hypothetical protein
L1_007_122G1_scaffold_578_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7796..17278)
DNA (9483bp) protein (3161aa)
YD repeat protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RR45_9FIRM
YD repeat protein {ECO:0000313|EMBL:EHL72395.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Rhs family protein
L1_007_122G1_scaffold_578_12
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17563..17913
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000363175A
hypothetical protein
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK80018.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_122G1_scaffold_578_13
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17930..18460
DNA (531bp) protein (177aa)
RNA polymerase sigma factor n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRY5_CLOPH
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_007_122G1_scaffold_578_14
unknown

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18465..19205
DNA (741bp) protein (247aa)

This feature has no annotations

Displaying 14 items

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