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L1_007_122G1_scaffold_593

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_593_1
unknown

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comp(55..699)
DNA (645bp) protein (215aa)

This feature has no annotations

L1_007_122G1_scaffold_593_2
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1046..1546
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
purE; Phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A573_9CLOT
L1_007_122G1_scaffold_593_3
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1587..3032
DNA (1446bp) protein (482aa)
purF; putative amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Amidophosphoribosyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6P4_ETHHY
L1_007_122G1_scaffold_593_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3088..4122
DNA (1035bp) protein (345aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
purM; Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
phosphoribosylaminoimidazole synthetase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035E7156
L1_007_122G1_scaffold_593_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4116..4739
DNA (624bp) protein (208aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RTC6_9FIRM
L1_007_122G1_scaffold_593_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4885..5589
DNA (705bp) protein (235aa)
IMP cyclohydrolase-like protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHR3_9FIRM
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EDS09031.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_007_122G1_scaffold_593_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5661..6824
DNA (1164bp) protein (388aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme n=2 Tax=Clostridium RepID=A7VU36_9CLOT
AICARFT/IMPCHase bienzyme {ECO:0000313|EMBL:EDO61682.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_007_122G1_scaffold_593_8
unknown

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6896..7507
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Streptococcus merionis RepID=UPI0003812EAE
L1_007_122G1_scaffold_593_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7524..8786
DNA (1263bp) protein (421aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU37_9CLOT
L1_007_122G1_scaffold_593_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8978..10540
DNA (1563bp) protein (521aa)
Efflux transporter RND family MFP subunit n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IW61_9FIRM
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDB42232.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
multidrug resistance efflux pump
L1_007_122G1_scaffold_593_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10558..11802
DNA (1245bp) protein (415aa)
ABC transporter permease protein n=2 Tax=root RepID=R5N3F7_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CCY92106.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
macrolide efflux ABC transporter permease
L1_007_122G1_scaffold_593_12
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11957..12610)
DNA (654bp) protein (218aa)
Ricin-type beta-trefoil lectin domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHT4_9FIRM
Ricin-type beta-trefoil lectin domain protein {ECO:0000313|EMBL:EDS09052.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
gmuG; mannan endo-1,4-beta-mannosidase
L1_007_122G1_scaffold_593_13
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12823..13782)
DNA (960bp) protein (320aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3K6_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:CDB41069.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
glycerate dehydrogenase
L1_007_122G1_scaffold_593_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13896..14189
DNA (294bp) protein (98aa)
Sporulation protein, YlmC/YmxH family n=2 Tax=Clostridium RepID=A7VU57_9CLOT
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CDC03750.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
sporulation protein, YlmC/YmxH family
L1_007_122G1_scaffold_593_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14232..15653)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MXX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90191.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L1_007_122G1_scaffold_593_16
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16101..16451
DNA (351bp) protein (117aa)
Cupin domain n=1 Tax=Coprococcus catus GD/7 RepID=D4JBV5_9FIRM
Cupin domain.
Cupin domain {ECO:0000313|EMBL:CBK81826.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_007_122G1_scaffold_593_17
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16608..17282
DNA (675bp) protein (225aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ADZ9_9CLOT
L1_007_122G1_scaffold_593_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17276..18169
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42223.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_593_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18166..19044
DNA (879bp) protein (293aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IW50_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDB42222.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
N-acetyltransferase GCN5
L1_007_122G1_scaffold_593_20
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19064..19180
DNA (117bp) protein (39aa)
hypothetical protein (EC:3.2.-.-)
DJ-1 family protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XZ33_9FIRM
DJ-1 family protein {ECO:0000313|EMBL:CDA19845.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Displaying 20 items

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