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L1_007_122G1_scaffold_605

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_605_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..427)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SNK4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHJ34534.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L1_007_122G1_scaffold_605_2
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(691..1626)
DNA (936bp) protein (312aa)
Hypothetical Membrane Spanning Protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T7B1_9CLOT
Hypothetical Membrane Spanning Protein {ECO:0000313|EMBL:CCZ61760.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Collagen triple helix repeat protein
L1_007_122G1_scaffold_605_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1771..2106)
DNA (336bp) protein (112aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D3AFC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC99482.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_605_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2221..2787)
DNA (567bp) protein (189aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AFC4_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFC99483.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
NUDIX hydrolase
L1_007_122G1_scaffold_605_5
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2886..3452
DNA (567bp) protein (189aa)
Putative cotJC protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TRW0_9CLOT
Putative cotJC protein {ECO:0000313|EMBL:CCZ61756.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L1_007_122G1_scaffold_605_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3445..4023)
DNA (579bp) protein (193aa)
HD domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AFC7_9CLOT
HD domain protein {ECO:0000313|EMBL:EFC99486.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Predicted hydrolases of HD superfamily
L1_007_122G1_scaffold_605_7
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4023..5945)
DNA (1923bp) protein (641aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
MutS domain V protein n=2 Tax=Clostridium RepID=D3AFC8_9CLOT
DNA mismatch repair protein MutS domain-containing protein
L1_007_122G1_scaffold_605_8
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6337..6819)
DNA (483bp) protein (161aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Hydrolase, NUDIX family n=2 Tax=Clostridium RepID=D3AFD0_9CLOT
Mutator MutT protein {ECO:0000313|EMBL:CCZ61753.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_605_9
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6861..7880)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TY07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61752.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_605_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7867..8367)
DNA (501bp) protein (167aa)
Sigma-70 region 2 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AT02_9CLOT
Sigma-70 region 2 {ECO:0000313|EMBL:EFC95055.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ECF family RNA polymerase sigma-24 subunit
L1_007_122G1_scaffold_605_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8444..8821)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AT01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC95054.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L1_007_122G1_scaffold_605_12
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8990..9712
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TEM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61749.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
AzlC family protein
L1_007_122G1_scaffold_605_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9705..10010
DNA (306bp) protein (102aa)
Branched-chain amino acid transport protein (AzlD) n=2 Tax=Clostridium RepID=D3ASZ8_9CLOT
Branched-chain amino acid transport protein {ECO:0000313|EMBL:CCZ61748.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
branched-chain amino acid transporter
L1_007_122G1_scaffold_605_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9999..10640)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TY01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61747.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_007_122G1_scaffold_605_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10612..13617)
DNA (3006bp) protein (1002aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Uncharacterized protein n=2 Tax=Clostridium RepID=R5TRV4_9CLOT
UvrD/Rep helicase family protein
L1_007_122G1_scaffold_605_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13852..17091)
DNA (3240bp) protein (1080aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
Putative DNA helicase II n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T789_9CLOT
hypothetical protein
L1_007_122G1_scaffold_605_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17266..18438
DNA (1173bp) protein (391aa)
ROK family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ARI2_9CLOT
ROK family protein {ECO:0000313|EMBL:EFC95572.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
transcriptional regulator
Displaying 17 items

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