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L1_007_122G1_scaffold_617

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_007_122G1_scaffold_617_1
unknown

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2..823
DNA (822bp) protein (274aa)

This feature has no annotations

L1_007_122G1_scaffold_617_2
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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956..1330
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE94_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG78388.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
GntR family transcriptional regulator
L1_007_122G1_scaffold_617_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1327..2226
DNA (900bp) protein (300aa)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXQ9_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDB42782.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ABC transporter
L1_007_122G1_scaffold_617_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2258..4600
DNA (2343bp) protein (781aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IBI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42781.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_007_122G1_scaffold_617_5
unknown

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4678..4782
DNA (105bp) protein (35aa)

This feature has no annotations

L1_007_122G1_scaffold_617_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5358..6347
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N1A2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90977.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex
L1_007_122G1_scaffold_617_7
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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6474..7304
DNA (831bp) protein (277aa)
Formamidopyrimidine-DNA glycosylase-like protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AFS7_SEBTE
Formamidopyrimidine-DNA glycosylase-like protein
Formamidopyrimidine-DNA glycosylase-like protein {ECO:0000313|EMBL:ACZ07962.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
L1_007_122G1_scaffold_617_8
unknown

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comp(7318..7575)
DNA (258bp) protein (86aa)

This feature has no annotations

L1_007_122G1_scaffold_617_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7785..8846
DNA (1062bp) protein (354aa)
YceG family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IBX7_9FIRM
YceG family protein {ECO:0000313|EMBL:CDB42916.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
aminodeoxychorismate lyase
L1_007_122G1_scaffold_617_10
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8886..9461
DNA (576bp) protein (192aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
Cu/Zn family superoxide dismutase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M880_9BACL
superoxide dismutase
L1_007_122G1_scaffold_617_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(9546..10220)
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GY21_9FIRM
L1_007_122G1_scaffold_617_12
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10274..11956)
DNA (1683bp) protein (561aa)
RNA helicase n=1 Tax=[Clostridium] glycolicum RepID=UPI00037055DB
RNA helicase {ECO:0000313|EMBL:KHS57414.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
DEAD/DEAH box helicase
L1_007_122G1_scaffold_617_13
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12105..13439)
DNA (1335bp) protein (445aa)
Membrane protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XZV7_9FIRM
Membrane protein {ECO:0000313|EMBL:CDA20155.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L1_007_122G1_scaffold_617_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13813..14097
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYP8_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Co-chaperonin GroES (HSP10)
L1_007_122G1_scaffold_617_15
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14141..15778
DNA (1638bp) protein (546aa)
60 kDa chaperonin n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DVU0_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
groL1; 60 kDa chaperonin
L1_007_122G1_scaffold_617_16
unknown

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comp(16325..16525)
DNA (201bp) protein (67aa)

This feature has no annotations

L1_007_122G1_scaffold_617_17
unknown

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comp(16578..16721)
DNA (144bp) protein (48aa)

This feature has no annotations

L1_007_122G1_scaffold_617_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16844..17788)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PR61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC12282.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L1_007_122G1_scaffold_617_19
unknown

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comp(17882..18091)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 19 items

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